- _ -

_add_weights_from_file() : core::scoring::ScoreFunction
_assignments() : protocols::noesy_assign::PeakAssignmentResidueMap
_atom_distance_cb() : core::scoring::sc::MolecularSurfaceCalculator
_BoolMover() : protocols::moves::_BoolMover
_get_scored_list() : protocols::abinitio::Templates
_notify_archive() : protocols::jd2::archive::MPIArchiveJobDistributor
_pmatch() : protocols::noesy_assign::Resonance
_read_constraints() : protocols::abinitio::Template
_read_file() : core::io::silent::SilentFileData
_static_type_name() : protocols::topology_broker::StartStructClaimer , core::fragment::Frame , protocols::topology_broker::JumpClaimer , protocols::topology_broker::FragmentClaimer , protocols::topology_broker::FoldandDockClaimer , protocols::topology_broker::FibrilModelingClaimer , protocols::topology_broker::DisulfJumpClaimer , protocols::topology_broker::LoopFragmentClaimer , protocols::topology_broker::CutBiasClaimer , protocols::topology_broker::MembraneTopologyClaimer , protocols::topology_broker::ConstraintClaimer , protocols::topology_broker::AsymFoldandDockClaimer , core::fragment::SingleResidueFragData , protocols::topology_broker::TemplateFragmentClaimer , core::fragment::DownJumpSRFD , core::fragment::JumpingFrame , core::fragment::UpJumpSRFD , protocols::topology_broker::PseudocontactShiftEnergyController , core::fragment::BBTorsionSRFD , core::fragment::BBTorsionAndAnglesSRFD , protocols::topology_broker::DensityScoringClaimer , protocols::topology_broker::CoordConstraintClaimer , protocols::topology_broker::SequenceClaimer , protocols::topology_broker::RigidChunkClaimer , core::fragment::SecstructSRFD , protocols::topology_broker::MetalloClaimer , protocols::topology_broker::TemplateJumpClaimer , protocols::topology_broker::PcsEnergyController
_write_partner_ids() : protocols::noesy_assign::FloatingResonance
_write_silent_struct() : core::io::silent::SilentFileData
_write_to_stream() : protocols::canonical_sampling::MultiTemperatureTrialCounter , protocols::noesy_assign::Resonance