- e -

• Edge : core::scoring::constraints::ConstraintEdge
• EdgeBase : protocols::flexpack::interaction_graph::FlexbbInteractionGraph
• EdgeClass : core::graph::UpperEdgeGraph< V, E > , core::graph::UEVertex< V, E >
• EdgeList : core::kinematics::FoldTree , core::kinematics::ShortestPathInFoldTree
• EdgeListConstIter : core::graph::Graph , core::scoring::constraints::CstResNeighbConstIterator , core::graph::Node
• EdgeListIter : core::graph::Node , core::graph::Edge , core::graph::Graph , core::scoring::constraints::CstResNeighbIterator
• element_type : boost::unordered_object_pool< T, UserAllocator >
• ElementSets : core::chemical::ChemicalManager
• Energies : core::scoring::MinimizationGraph
• EnergiesEdge : protocols::toolbox::pose_metric_calculators::DecomposeAndReweightEnergiesCalculator
• EnergiesGraph : protocols::toolbox::pose_metric_calculators::DecomposeAndReweightEnergiesCalculator
• EnergiesIterator : core::scoring::MinimizationGraph
• EnergiesUpperEdgeListConstIter : protocols::toolbox::pose_metric_calculators::DecomposeAndReweightEnergiesCalculator
• EnergiesUpperEdgeListIter : protocols::toolbox::pose_metric_calculators::DecomposeAndReweightEnergiesCalculator
• EnergiesVertex : protocols::toolbox::pose_metric_calculators::DecomposeAndReweightEnergiesCalculator
• EnergyEvent : core::pose::Pose
• EnergyGraph : core::scoring::Energies , protocols::fldsgn::potentials::sspot::HSPairPotential , protocols::fldsgn::potentials::sspot::SSPairPotential
• EnergyMap : protocols::fldsgn::potentials::AACompositionEnergy , protocols::fldsgn::potentials::sspot::NatbiasSecondaryStructureEnergy , protocols::optimize_weights::IterativeOptEDriver , protocols::optimize_weights::OptEPositionData , protocols::optimize_weights::OptEData , protocols::optimize_weights::OptEMultifunc , protocols::optimize_weights::WrapperOptEMultifunc , protocols::simple_moves::GreenPacker , core::scoring::constraints::SequenceProfileConstraint , core::scoring::Energies , core::scoring::EnergyEdge , protocols::constraints_additional::SequenceCoupling1BDConstraint , protocols::constraints_additional::SequenceCouplingConstraint
• EnergyMethodOP : protocols::fldsgn::potentials::AACompositionEnergy , protocols::fldsgn::potentials::AACompositionEnergyCreator , protocols::fldsgn::potentials::sspot::NatbiasSecondaryStructureEnergy , protocols::fldsgn::potentials::sspot::NatbiasSecondaryStructureEnergyCreator
• EnergyMethodOptions : protocols::fldsgn::potentials::AACompositionEnergyCreator , protocols::fldsgn::potentials::sspot::NatbiasSecondaryStructureEnergyCreator
• EnergyVector : core::scoring::mm::MMLJEnergyTable
• EntElemEq : protocols::pack_daemon::PackDaemon
• Entity : protocols::pack_daemon::DynamicAggregateFunction , protocols::pack_daemon::EntityFunc , protocols::pack_daemon::MultistateAggregateFunction , protocols::pack_daemon::MultistateFitnessFunction , protocols::pack_daemon::PackDaemon , protocols::pack_daemon::DaemonSet
• EntityAndScore : protocols::pack_daemon::EntityHistoryLT , protocols::pack_daemon::MultistateFitnessFunction
• EntityCAP : protocols::genetic_algorithm::GeneticAlgorithm
• EntityCAPs : protocols::genetic_algorithm::GeneticAlgorithm
• EntityCOP : protocols::genetic_algorithm::EntityRandomizer , protocols::genetic_algorithm::GeneticAlgorithm
• EntityCOPs : protocols::genetic_algorithm::GeneticAlgorithm
• EntityElement : protocols::pack_daemon::PackDaemon
• EntityElementOP : protocols::multistate_design::PosTypeCreator , protocols::pack_daemon::PackDaemon , protocols::multistate_design::MultiStateEntity< T > , protocols::multistate_design::PosType
• EntityElements : protocols::pack_daemon::PackDaemon
• EntityHistory : protocols::pack_daemon::MultistateFitnessFunction
• EntityOP : protocols::genetic_algorithm::EntityRandomizer , protocols::genetic_algorithm::GeneticAlgorithm , protocols::multistate_design::MultiStateEntity< T > , protocols::pack_daemon::PackDaemon , protocols::pack_daemon::DaemonSet , protocols::pack_daemon::MultistateFitnessFunction
• EntityRandomizerOP : protocols::genetic_algorithm::GeneticAlgorithm
• EntityToRotamerHash : protocols::pack_daemon::PackDaemon
• Etable : core::scoring::etable::MembEtable
• Evaluator : core::scoring::etable::TableLookupEtableEnergy , core::scoring::etable::AnalyticEtableEnergy
• Evaluator_MCFI_ID_Pair : protocols::match::downstream::SecondaryMatcherToDownstreamResidue , protocols::match::downstream::SecondaryMatcherToUpstreamResidue
• EvaluatorCreatorMap : protocols::evaluation::EvaluatorFactory
• EvaluatorList : protocols::evaluation::MetaPoseEvaluator
• EvaluatorMap : protocols::jd2::archive::EvaluatedArchive
• EvaluatorSet : protocols::match::downstream::SecondaryMatcherToDownstreamResidue , protocols::match::downstream::SecondaryMatcherToUpstreamResidue
• ExchangeSchedule : protocols::canonical_sampling::HamiltonianExchange , protocols::canonical_sampling::ParallelTempering
• ExperimentalTechniques : core::io::pdb::HeaderInformation
• Expression : protocols::pack_daemon::EntityFunc , protocols::pack_daemon::DynamicAggregateFunction
• ExpressionCOP : protocols::pack_daemon::SurrogateVariableExpression , protocols::pack_daemon::EntityFunc , protocols::pack_daemon::VectorFunction , protocols::pack_daemon::VectorExpression , protocols::pack_daemon::ExpExpression , protocols::pack_daemon::LnExpression , protocols::pack_daemon::InSetExpression , protocols::pack_daemon::VectorExpressionCreator , protocols::pack_daemon::EntityFuncExpressionCreator , protocols::pack_daemon::VectorFunction2 , protocols::pack_daemon::DynamicAggregateFunction , protocols::pack_daemon::PowExpression
• ExpressionOP : protocols::pack_daemon::EntityFunc , protocols::pack_daemon::DynamicAggregateFunction
• ExpressionValues : protocols::pack_daemon::DynamicAggregateFunction
• Extent : core::fragment::picking_old::vall::gen::SecStructGen , core::fragment::picking_old::vall::eval::ABEGOEval , core::fragment::picking_old::vall::eval::EnergyEval , core::fragment::picking_old::vall::gen::LengthGen , core::fragment::picking_old::concepts::ExtentEvaluator< Bookmark, Ext > , core::fragment::picking_old::vall::eval::IdentityEval , core::fragment::picking_old::concepts::Librarian< Bookmark, ExtentEvaluator, ExtentGenerator, Library > , core::fragment::picking_old::vall::eval::VallFragmentEval , core::fragment::picking_old::vall::gen::VallFragmentGen
• ExtentEvalCOP : core::fragment::picking_old::vall::VallLibrarian , core::fragment::picking_old::concepts::Librarian< Bookmark, ExtentEvaluator, ExtentGenerator, Library >
• ExtentEvalOP : core::fragment::picking_old::concepts::Librarian< Bookmark, ExtentEvaluator, ExtentGenerator, Library > , core::fragment::picking_old::vall::VallLibrarian
• ExtentEvalOPs : core::fragment::picking_old::concepts::Librarian< Bookmark, ExtentEvaluator, ExtentGenerator, Library > , core::fragment::picking_old::vall::VallLibrarian
• ExtentGenCOP : core::fragment::picking_old::vall::VallLibrarian , core::fragment::picking_old::concepts::Librarian< Bookmark, ExtentEvaluator, ExtentGenerator, Library >
• ExtentGenOP : core::fragment::picking_old::concepts::Librarian< Bookmark, ExtentEvaluator, ExtentGenerator, Library > , core::fragment::picking_old::vall::VallLibrarian
• ExtentGenOPs : core::fragment::picking_old::concepts::Librarian< Bookmark, ExtentEvaluator, ExtentGenerator, Library > , core::fragment::picking_old::vall::VallLibrarian
• ExtraResidues : protocols::comparative_modeling::ThreadingJobInputter
• ExtraRotSample : protocols::match::upstream::FullChiSampleSet , protocols::match::upstream::SampleStrategyData