- i -

• IdealBondLengthSets : core::chemical::ChemicalManager
• IdentityEvent : core::conformation::Conformation
• index_mask_pair : protocols::match::Bool3DGrid
• IndexList : core::fragment::CacheWrapper< T, XCacheUnit >
• IndexVector : protocols::evaluation::PCA
• InnerCycleList : protocols::loops::loop_mover::refine::LoopRefineInnerCycleContainer
• InnerIterator : core::fragment::OrderedFragSetIterator_
• input_itr : protocols::inputter::InputterStream
• InteractionGraphBaseCOP : protocols::pack_daemon::PackDaemon , protocols::simple_moves::PackRotamersMover
• InteractionGraphBaseOP : core::pack::annealer::FixbbCoupledRotamerSimAnnealer , core::pack::annealer::FixbbLinkingRotamerSimAnnealer , core::pack::annealer::FixbbSimAnnealer , protocols::pack_daemon::PackDaemon , protocols::simple_moves::PackRotamersMover
• Interval : protocols::fldsgn::BluePrintBDR , protocols::forge::components::BDR , protocols::forge::components::BDRSegmentInfo , protocols::forge::components::VarLengthBuild , protocols::forge::remodel::RemodelMover
• Interval2Interval : protocols::forge::build::BuildManager
• Interval2MoveMap : protocols::forge::build::BuildManager
• Interval2Positions : protocols::forge::build::BuildManager
• IntraClusterIterator : protocols::toolbox::ClusterBase
• invrots_node_ptrs_pair : protocols::toolbox::match_enzdes_util::InvrotTreeNode
• iterator : core::scoring::EMapVector , core::kinematics::FoldTree , core::coarse::TranslatorSet , protocols::rosetta_scripts::ParsedProtocol , protocols::filters::CompoundFilter , protocols::jumping::JumpSetup , protocols::hotspot_hashing::HotspotStubSet , protocols::wum::SilentStructStore , protocols::wum::WorkUnitManager , protocols::loops::Loops , protocols::jumping::ResiduePairJumpSetup , protocols::moves::DataMap , protocols::jumping::JumpSelector , protocols::protein_interface_design::movers::PlacementAuctionMover , core::scoring::constraints::ResidueConstraints , protocols::wum2::WUQueue , protocols::protein_interface_design::movers::ResidueBBDofs , protocols::noesy_assign::CrossPeakList , protocols::wum::WorkUnitQueue , core::scoring::dssp::StrandPairingSet , protocols::noesy_assign::CrossPeak , core::optimization::MinimizerMap
• iterator_category : protocols::toolbox::OP_const_iterator< const_iterator, SomeOP > , core::io::silent::SilentFileData::iterator , core::io::silent::SilentFileData::const_iterator , core::kinematics::tree::Atom , core::kinematics::RT