core::io::raw_data::ScoreStruct Class Reference

#include <ScoreStruct.hh>

Inheritance diagram for core::io::raw_data::ScoreStruct:

Collaboration diagram for core::io::raw_data::ScoreStruct:

Public Member Functions
	ScoreStruct ()
	ScoreStruct (core::pose::Pose, std::string tag="empty_tag")
	~ScoreStruct ()
void	fill_pose (core::pose::Pose &)
	Fill a Pose with the conformation information in this RawStruct and the FA_STANDARD ResidueTypeSet. This is a virtual method which must be implemented by classes derived from RawStruct. More...
virtual void	fill_pose (core::pose::Pose &, core::chemical::ResidueTypeSet const &residue_set)
	Fill a Pose with the conformation information in this RawStruct and the ResidueTypeSet provided by the caller. This is a virtual method which must be implemented by classes derived from RawStruct. More...
virtual Real	get_debug_rmsd ()
	Do some sort of comparison between the actual RMSD of this silent-struct and the cached coordinates. Used for RawStruct objects that are rebuild from torsions or other shortened representations of data. More...
virtual void	print_conformation (std::ostream &out) const
	Print the conformation information contained in this object to the given ozstream. More...
Public Member Functions inherited from core::io::raw_data::RawStruct
virtual	~RawStruct ()
void	print_header (std::ostream &out, std::map< std::string, core::Real > const &score_map, std::map< std::string, std::string > const &string_map=(std::map< std::string, std::string >()), bool print_sequence=true) const
	print out a header line to the given ozstream. In a rosetta++ silent-file, this contained the lines SEQUENCE: <protein sequence>="">: More...
void	print_scores (std::ostream &out, std::map< std::string, core::Real > const &score_map, std::map< std::string, std::string > const &string_map=(std::map< std::string, std::string >())) const
	print out a SCORE line to the given ozstream. More...
Size	nres ()
	data access methods. More...
std::string	decoy_tag ()
	returns the tag associated with this RawStruct More...
std::string	sequence ()
	returns the sequence for this RawStruct More...
void	nres (Size nres)
	returns the number of residues in this RawStruct More...
void	decoy_tag (std::string tag)
	sets the tag associated with this RawStruct More...
void	sequence (std::string sequence)
	sets the sequence for this RawStruct More...

Additional Inherited Members
Protected Attributes inherited from core::io::raw_data::RawStruct
Size	nres_
std::string	decoy_tag_
std::string	sequence_

Detailed Description

Definition at line 39 of file ScoreStruct.hh.

Constructor & Destructor Documentation

core::io::raw_data::ScoreStruct::ScoreStruct

(

)

Definition at line 31 of file ScoreStruct.cc.

References core::io::raw_data::RawStruct::decoy_tag_.

core::io::raw_data::ScoreStruct::ScoreStruct	(	core::pose::Pose	,
		std::string	tag = "empty_tag"
	)

Definition at line 35 of file ScoreStruct.cc.

References core::io::raw_data::RawStruct::decoy_tag_.

core::io::raw_data::ScoreStruct::~ScoreStruct ( )

inline

Definition at line 51 of file ScoreStruct.hh.

Member Function Documentation

void core::io::raw_data::ScoreStruct::fill_pose ( core::pose::Pose &  )

virtual

Fill a Pose with the conformation information in this RawStruct and the FA_STANDARD ResidueTypeSet. This is a virtual method which must be implemented by classes derived from RawStruct.

Implements core::io::raw_data::RawStruct.

Definition at line 43 of file ScoreStruct.cc.

void core::io::raw_data::ScoreStruct::fill_pose ( core::pose::Pose &  , core::chemical::ResidueTypeSet const &  residue_set  )

virtual

Fill a Pose with the conformation information in this RawStruct and the ResidueTypeSet provided by the caller. This is a virtual method which must be implemented by classes derived from RawStruct.

Implements core::io::raw_data::RawStruct.

Definition at line 49 of file ScoreStruct.cc.

Real core::io::raw_data::ScoreStruct::get_debug_rmsd ( )

virtual

Do some sort of comparison between the actual RMSD of this silent-struct and the cached coordinates. Used for RawStruct objects that are rebuild from torsions or other shortened representations of data.

Reimplemented from core::io::raw_data::RawStruct.

Definition at line 61 of file ScoreStruct.cc.

void core::io::raw_data::ScoreStruct::print_conformation ( std::ostream &  out) const

virtual

Print the conformation information contained in this object to the given ozstream.

Reimplemented from core::io::raw_data::RawStruct.

Definition at line 57 of file ScoreStruct.cc.

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The documentation for this class was generated from the following files:

• src/core/io/raw_data/ScoreStruct.hh
• src/core/io/raw_data/ScoreStruct.cc