PartialThreadingMover.hh

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// -*- mode:c++;tab-width:2;indent-tabs-mode:t;show-trailing-whitespace:t;rm-trailing-spaces:t -*-
// vi: set ts=2 noet:
//
// (c) Copyright Rosetta Commons Member Institutions.
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// (c) The Rosetta software is developed by the contributing members of the Rosetta Commons.
// (c) For more information, see http://www.rosettacommons.org. Questions about this can be
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/// @file protocols/comparative_modeling/PartialThreadingMover.hh
/// @brief
/// @author James Thompson

// libRosetta headers

#ifndef INCLUDED_protocols_comparative_modeling_PartialThreadingMover_HH
#define INCLUDED_protocols_comparative_modeling_PartialThreadingMover_HH

#include <protocols/comparative_modeling/ThreadingMover.hh>

#include <core/types.hh>
#include <core/pose/Pose.hh>

#include <protocols/moves/DataMap.fwd.hh>
#include <protocols/filters/Filter.fwd.hh>
#include <protocols/moves/Mover.fwd.hh>

#include <string>

#include <utility/vector1.hh>


namespace protocols {
namespace comparative_modeling {

class PartialThreadingMover : public ThreadingMover {

public:

  /// @brief align describes the association between the query and template
  /// sequences, template_pose is the conformation from which to build a
  /// threading model.
  PartialThreadingMover(
    core::sequence::SequenceAlignment const & align,
    core::pose::Pose const & template_pose
  );

  virtual ~PartialThreadingMover() {}

  /// @brief Threads the given Pose onto the template_pose with the
  /// SequenceAlignment provided.
  virtual void apply( core::pose::Pose & query_pose );

  virtual std::string get_name() const;

  void parse_my_tag(
    TagPtr const tag,
    protocols::moves::DataMap & data,
    protocols::filters::Filters_map const & filters,
    protocols::moves::Movers_map const & movers,
    Pose const & pose
  );

}; // PartialThreadingMover

} // comparative_modeling
} // protocols

#endif