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src
protocols
scoring
methods
InterchainPairEnergy.hh
Go to the documentation of this file.
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// -*- mode:c++;tab-width:2;indent-tabs-mode:t;show-trailing-whitespace:t;rm-trailing-spaces:t -*-
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// vi: set ts=2 noet:
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//
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// (c) Copyright Rosetta Commons Member Institutions.
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// (c) This file is part of the Rosetta software suite and is made available under license.
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// (c) The Rosetta software is developed by the contributing members of the Rosetta Commons.
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// (c) For more information, see http://www.rosettacommons.org. Questions about this can be
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// (c) addressed to University of Washington UW TechTransfer, email: license@u.washington.edu.
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/// @file core/scoring/methods/InterchainPairEnergy.hh
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/// @brief Statistically derived rotamer pair potentials
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/// @detailed For docking (or between chains) only those residues at the interface
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/// and between the two interfaces need to be evaluated
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/// @author Monica Berrondo
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#ifndef INCLUDED_protocols_scoring_methods_InterchainPairEnergy_hh
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#define INCLUDED_protocols_scoring_methods_InterchainPairEnergy_hh
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#include <
core/scoring/methods/ContextIndependentTwoBodyEnergy.hh
>
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#include <
protocols/scoring/InterchainPotential.hh
>
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#include <
core/scoring/ScoreFunction.fwd.hh
>
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#include <
core/conformation/Residue.fwd.hh
>
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// Project headers
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#include <
core/pose/Pose.fwd.hh
>
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#include <utility/vector1.hh>
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// Utility headers
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namespace
protocols {
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namespace
scoring {
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namespace
methods {
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///
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class
InterchainPairEnergy
:
public
core::scoring::methods::ContextIndependentTwoBodyEnergy
{
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public
:
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typedef
core::scoring::methods::ContextIndependentTwoBodyEnergy
parent
;
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public
:
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///
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InterchainPairEnergy
();
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/// clone
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virtual
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core::scoring::methods::EnergyMethodOP
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clone
()
const
;
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virtual
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void
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setup_for_scoring
(
core::pose::Pose
& pose,
core::scoring::ScoreFunction
const
& )
const
;
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/////////////////////////////////////////////////////////////////////////////
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// scoring
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/////////////////////////////////////////////////////////////////////////////
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virtual
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void
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residue_pair_energy
(
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core::conformation::Residue
const
& rsd1,
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core::conformation::Residue
const
& rsd2,
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core::pose::Pose
const
&,
// pose,
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core::scoring::ScoreFunction
const
&,
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core::scoring::EnergyMap
& emap
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)
const
;
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virtual
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void
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finalize_total_energy
(
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core::pose::Pose
& pose,
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core::scoring::ScoreFunction
const
&,
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core::scoring::EnergyMap
&
// emap
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)
const
;
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/// This method *should* admit to defining intraresidue energies
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virtual
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bool
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defines_intrares_energy
(
core::scoring::EnergyMap
const
& )
const
{
return
false
; }
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void
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eval_intrares_energy
(
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core::conformation::Residue
const
&,
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core::pose::Pose
const
&,
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core::scoring::ScoreFunction
const
&,
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core::scoring::EnergyMap
&
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)
const
{}
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virtual
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core::Distance
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atomic_interaction_cutoff
()
const
;
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virtual
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void
indicate_required_context_graphs
(
utility::vector1< bool >
& )
const
{}
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/////////////////////////////////////////////////////////////////////////////
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// data
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/////////////////////////////////////////////////////////////////////////////
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private
:
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// const-ref to scoring database
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protocols::scoring::InterchainPotential
const
*
potential_
;
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virtual
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core::Size
version
()
const
;
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};
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}
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}
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}
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#endif
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