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core::scoring::constraints::CstResNeighbIterator Class Reference

#include <ConstraintEnergyContainer.hh>

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Public Types

typedef graph::Node::EdgeListIter EdgeListIter
 

Public Member Functions

 CstResNeighbIterator (Size focused_node, EdgeListIter edge_iter)
 
virtual ~CstResNeighbIterator ()
 
virtual
ResidueNeighborIterator const & 		operator= (ResidueNeighborIterator const &)
 
virtual
ResidueNeighborIterator const & 		operator++ ()
 
virtual bool operator== (ResidueNeighborIterator const &) const
 
virtual bool operator!= (ResidueNeighborIterator const &) const
 
virtual Size upper_neighbor_id () const
 
virtual Size lower_neighbor_id () const
 
virtual Size residue_iterated_on () const
 
virtual Size neighbor_id () const
 
virtual void save_energy (EnergyMap const &)
 
virtual void retrieve_energy (EnergyMap &) const
 
virtual void accumulate_energy (EnergyMap &) const
 
virtual void mark_energy_computed ()
 
virtual void mark_energy_uncomputed ()
 
virtual bool energy_computed () const
 
- Public Member Functions inherited from core::scoring::ResidueNeighborIterator
virtual ~ResidueNeighborIterator ()
 

Static Protected Member Functions

static ConstraintEdge * downcast_cstedge (graph::Edge *)
 

Private Attributes

Size focused_node_
 
EdgeListIter edge_iter_
 

Detailed Description

Definition at line 42 of file ConstraintEnergyContainer.hh.

Member Typedef Documentation

typedef graph::Node::EdgeListIter core::scoring::constraints::CstResNeighbIterator::EdgeListIter

Definition at line 44 of file ConstraintEnergyContainer.hh.

Constructor & Destructor Documentation

core::scoring::constraints::CstResNeighbIterator::CstResNeighbIterator ( Size  focused_node,
CstResNeighbIterator::EdgeListIter  edge_iter 
)

Definition at line 34 of file ConstraintEnergyContainer.cc.

core::scoring::constraints::CstResNeighbIterator::~CstResNeighbIterator ( )
virtual

Definition at line 44 of file ConstraintEnergyContainer.cc.

Member Function Documentation

void core::scoring::constraints::CstResNeighbIterator::accumulate_energy ( EnergyMap &  emap) const
virtual

Implements core::scoring::ResidueNeighborIterator.

Definition at line 137 of file ConstraintEnergyContainer.cc.

References core::scoring::angle_constraint, core::scoring::constraints::ConstraintEdge::angle_constraint_energy(), core::scoring::atom_pair_constraint, core::scoring::constraints::ConstraintEdge::atom_pair_constraint_energy(), core::scoring::backbone_stub_constraint, core::scoring::constraints::ConstraintEdge::backbone_stub_constraint_energy(), core::scoring::coordinate_constraint, core::scoring::constraints::ConstraintEdge::coordinate_constraint_energy(), core::scoring::dihedral_constraint, core::scoring::constraints::ConstraintEdge::dihedral_constraint_energy(), downcast_cstedge(), core::scoring::res_type_linking_constraint, core::scoring::constraints::ConstraintEdge::res_type_linking_constraint_energy(), core::scoring::rna_bond_geometry, and core::scoring::constraints::ConstraintEdge::rna_bond_geometry_energy().

ConstraintEdge * core::scoring::constraints::CstResNeighbIterator::downcast_cstedge ( graph::Edge *  edge)
staticprotected

Definition at line 167 of file ConstraintEnergyContainer.cc.

Referenced by accumulate_energy(), energy_computed(), mark_energy_computed(), mark_energy_uncomputed(), retrieve_energy(), and save_energy().

bool core::scoring::constraints::CstResNeighbIterator::energy_computed ( ) const
virtual

Implements core::scoring::ResidueNeighborIterator.

Definition at line 161 of file ConstraintEnergyContainer.cc.

References downcast_cstedge(), and core::scoring::constraints::ConstraintEdge::energy_computed().

Size core::scoring::constraints::CstResNeighbIterator::lower_neighbor_id ( ) const
virtual

Implements core::scoring::ResidueNeighborIterator.

Definition at line 90 of file ConstraintEnergyContainer.cc.

void core::scoring::constraints::CstResNeighbIterator::mark_energy_computed ( )
virtual

Implements core::scoring::ResidueNeighborIterator.

Definition at line 149 of file ConstraintEnergyContainer.cc.

References downcast_cstedge(), and core::scoring::constraints::ConstraintEdge::energy_computed().

void core::scoring::constraints::CstResNeighbIterator::mark_energy_uncomputed ( )
virtual

Implements core::scoring::ResidueNeighborIterator.

Definition at line 154 of file ConstraintEnergyContainer.cc.

References downcast_cstedge(), and core::scoring::constraints::ConstraintEdge::energy_computed().

Size core::scoring::constraints::CstResNeighbIterator::neighbor_id ( ) const
virtual

Implements core::scoring::ResidueNeighborIterator.

Definition at line 102 of file ConstraintEnergyContainer.cc.

References focused_node_.

bool core::scoring::constraints::CstResNeighbIterator::operator!= ( ResidueNeighborIterator const &  rhs) const
virtual

Implements core::scoring::ResidueNeighborIterator.

Definition at line 75 of file ConstraintEnergyContainer.cc.

References edge_iter_.

ResidueNeighborIterator const & core::scoring::constraints::CstResNeighbIterator::operator++ ( )
virtual

Implements core::scoring::ResidueNeighborIterator.

Definition at line 59 of file ConstraintEnergyContainer.cc.

References edge_iter_.

ResidueNeighborIterator const & core::scoring::constraints::CstResNeighbIterator::operator= ( ResidueNeighborIterator const &  rhs)
virtual

Implements core::scoring::ResidueNeighborIterator.

Definition at line 48 of file ConstraintEnergyContainer.cc.

References edge_iter_, and focused_node_.

bool core::scoring::constraints::CstResNeighbIterator::operator== ( ResidueNeighborIterator const &  rhs) const
virtual

Implements core::scoring::ResidueNeighborIterator.

Definition at line 66 of file ConstraintEnergyContainer.cc.

References edge_iter_.

Size core::scoring::constraints::CstResNeighbIterator::residue_iterated_on ( ) const
virtual

Implements core::scoring::ResidueNeighborIterator.

Definition at line 96 of file ConstraintEnergyContainer.cc.

References focused_node_.

void core::scoring::constraints::CstResNeighbIterator::retrieve_energy ( EnergyMap &  emap) const
virtual

Implements core::scoring::ResidueNeighborIterator.

Definition at line 123 of file ConstraintEnergyContainer.cc.

References core::scoring::angle_constraint, core::scoring::constraints::ConstraintEdge::angle_constraint_energy(), core::scoring::atom_pair_constraint, core::scoring::constraints::ConstraintEdge::atom_pair_constraint_energy(), core::scoring::backbone_stub_constraint, core::scoring::constraints::ConstraintEdge::backbone_stub_constraint_energy(), core::scoring::coordinate_constraint, core::scoring::constraints::ConstraintEdge::coordinate_constraint_energy(), core::scoring::dihedral_constraint, core::scoring::constraints::ConstraintEdge::dihedral_constraint_energy(), downcast_cstedge(), core::scoring::res_type_linking_constraint, core::scoring::constraints::ConstraintEdge::res_type_linking_constraint_energy(), core::scoring::rna_bond_geometry, and core::scoring::constraints::ConstraintEdge::rna_bond_geometry_energy().

void core::scoring::constraints::CstResNeighbIterator::save_energy ( EnergyMap const &  emap)
virtual

Implements core::scoring::ResidueNeighborIterator.

Definition at line 109 of file ConstraintEnergyContainer.cc.

References core::scoring::angle_constraint, core::scoring::constraints::ConstraintEdge::angle_constraint_energy(), core::scoring::atom_pair_constraint, core::scoring::constraints::ConstraintEdge::atom_pair_constraint_energy(), core::scoring::backbone_stub_constraint, core::scoring::constraints::ConstraintEdge::backbone_stub_constraint_energy(), core::scoring::coordinate_constraint, core::scoring::constraints::ConstraintEdge::coordinate_constraint_energy(), core::scoring::dihedral_constraint, core::scoring::constraints::ConstraintEdge::dihedral_constraint_energy(), downcast_cstedge(), core::scoring::res_type_linking_constraint, core::scoring::constraints::ConstraintEdge::res_type_linking_constraint_energy(), core::scoring::rna_bond_geometry, and core::scoring::constraints::ConstraintEdge::rna_bond_geometry_energy().

Size core::scoring::constraints::CstResNeighbIterator::upper_neighbor_id ( ) const
virtual

Implements core::scoring::ResidueNeighborIterator.

Definition at line 84 of file ConstraintEnergyContainer.cc.

Member Data Documentation

EdgeListIter core::scoring::constraints::CstResNeighbIterator::edge_iter_
private

Definition at line 77 of file ConstraintEnergyContainer.hh.

Referenced by operator!=(), operator++(), operator=(), and operator==().

Size core::scoring::constraints::CstResNeighbIterator::focused_node_
private

Definition at line 76 of file ConstraintEnergyContainer.hh.

Referenced by neighbor_id(), operator=(), and residue_iterated_on().

The documentation for this class was generated from the following files:
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