protocols::genetic_algorithm Namespace Reference

Classes
class	EntityElement
	Entity element. More...
class	EntityElementCreator
	Entity element creator. More...
class	EntityElementFactory
	Entity element factory. More...
class	EntityElementRegistrator
class	Entity
struct	Vec1Hash
struct	EntityElementsEqual
class	EntityRandomizer
class	DiscreteRandomizer
class	PositionSpecificRandomizer
	different set of choices at each position in Entity's traits More...
class	FitnessFunction
class	GeneticAlgorithm

Typedefs
typedef utility::pointer::owning_ptr < EntityElement >	EntityElementOP
typedef utility::pointer::owning_ptr < EntityElement const >	EntityElementCOP
typedef utility::vector1 < EntityElementOP >	EntityElements
typedef utility::pointer::owning_ptr < EntityElementCreator >	EntityElementCreatorOP
typedef utility::pointer::owning_ptr < EntityElementCreator const >	EntityElementCreatorCOP
typedef utility::pointer::owning_ptr < Entity >	EntityOP
typedef utility::pointer::owning_ptr < Entity const >	EntityCOP
typedef utility::pointer::owning_ptr < GeneticAlgorithm >	GeneticAlgorithmOP
typedef utility::pointer::owning_ptr < GeneticAlgorithm const >	GeneticAlgorithmCOP

Functions
std::ostream &	operator<< (std::ostream &os, Entity const &entity)
template<typename T >
bool	lt_OP_deref (utility::pointer::owning_ptr< T > const &a, utility::pointer::owning_ptr< T > const &b)
	for sorting owning pointers by that to which they point More...
template<typename T >
bool	eq_OP_deref (utility::pointer::owning_ptr< T > const &a, utility::pointer::owning_ptr< T > const &b)
	for assessing equality between owning pointers by that to which they point More...
static basic::Tracer	TR ("protocols.genetic_algorithm")

Typedef Documentation

typedef utility::pointer::owning_ptr< Entity const > protocols::genetic_algorithm::EntityCOP

Definition at line 39 of file Entity.fwd.hh.

typedef utility::pointer::owning_ptr< EntityElement const > protocols::genetic_algorithm::EntityElementCOP

Definition at line 26 of file Entity.fwd.hh.

typedef utility::pointer::owning_ptr< EntityElementCreator const > protocols::genetic_algorithm::EntityElementCreatorCOP

Definition at line 33 of file Entity.fwd.hh.

typedef utility::pointer::owning_ptr< EntityElementCreator > protocols::genetic_algorithm::EntityElementCreatorOP

Definition at line 31 of file Entity.fwd.hh.

typedef utility::pointer::owning_ptr< EntityElement > protocols::genetic_algorithm::EntityElementOP

Definition at line 24 of file Entity.fwd.hh.

typedef utility::vector1< EntityElementOP > protocols::genetic_algorithm::EntityElements

Definition at line 28 of file Entity.fwd.hh.

typedef utility::pointer::owning_ptr< Entity > protocols::genetic_algorithm::EntityOP

Definition at line 37 of file Entity.fwd.hh.

typedef utility::pointer::owning_ptr< GeneticAlgorithm const > protocols::genetic_algorithm::GeneticAlgorithmCOP

Definition at line 25 of file GeneticAlgorithm.fwd.hh.

typedef utility::pointer::owning_ptr< GeneticAlgorithm > protocols::genetic_algorithm::GeneticAlgorithmOP

Definition at line 22 of file GeneticAlgorithm.fwd.hh.

Function Documentation

template<typename T >

bool protocols::genetic_algorithm::eq_OP_deref	(	utility::pointer::owning_ptr< T > const &	a,
		utility::pointer::owning_ptr< T > const &	b
	)

for assessing equality between owning pointers by that to which they point

Definition at line 175 of file Entity.hh.

References protocols::match::upstream::b.

template<typename T >

bool protocols::genetic_algorithm::lt_OP_deref	(	utility::pointer::owning_ptr< T > const &	a,
		utility::pointer::owning_ptr< T > const &	b
	)

for sorting owning pointers by that to which they point

Definition at line 162 of file Entity.hh.

References protocols::match::upstream::b.

std::ostream & protocols::genetic_algorithm::operator<<	(	std::ostream &	os,
		Entity const &	entity
	)

Definition at line 339 of file Entity.cc.

References protocols::genetic_algorithm::Entity::show().

static basic::Tracer protocols::genetic_algorithm::TR ( "protocols.genetic_algorithm"  )

static

Referenced by protocols::genetic_algorithm::GeneticAlgorithm::read_entities_checkpoint().