fragment_scoring_utilities.cc File Reference

#include <protocols/frag_picker/scores/fragment_scoring_utilities.hh>
#include <utility/vector1.hh>

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Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::frag_picker
	protocols::frag_picker::scores

Constant Groups
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::frag_picker
	protocols::frag_picker::scores

Functions
void	protocols::frag_picker::scores::create_cache (utility::vector1< Size > &frag_sizes, Size query_len, Size longest_vall_chunk, utility::vector1< Matrix > &cache)
void	protocols::frag_picker::scores::allocate_matrix (Size i_size, Size j_size, Matrix &dst)
void	protocols::frag_picker::scores::do_one_line (Size start_i, Size start_j, Matrix &small_scores, Size frag_len, Matrix &frag_scores)
void	protocols::frag_picker::scores::rolling_score (Matrix &small_scores, Size frag_len, Matrix &frag_scores)