protocols::toolbox::task_operations::LimitAromaChi2Operation Class Reference

#include <LimitAromaChi2Operation.hh>

Inheritance diagram for protocols::toolbox::task_operations::LimitAromaChi2Operation:

Collaboration diagram for protocols::toolbox::task_operations::LimitAromaChi2Operation:

Public Types
typedef core::Real	Real
typedef core::pose::Pose	Pose
typedef core::pack::task::PackerTask	PackerTask
typedef core::pack::task::operation::TaskOperation	TaskOperation
typedef core::pack::task::operation::TaskOperationOP	TaskOperationOP
typedef TaskOperation	parent
typedef utility::tag::TagPtr	TagPtr
Public Types inherited from core::pack::task::operation::TaskOperation
typedef utility::tag::TagPtr	TagPtr
typedef pose::Pose	Pose

Public Member Functions
	LimitAromaChi2Operation ()
	default constructor More...
virtual	~LimitAromaChi2Operation ()
	destructor More...
virtual TaskOperationOP	clone () const
	make clone More...
Real	chi2max () const
	max chi2 for picking rotamers of YFH More...
Real	chi2min () const
	min chi2 for picking rotamers of YFH More...
bool	include_trp () const
	include TRP ? More...
void	chi2max (Real const r)
	max chi2 for picking rotamers of YFH More...
void	chi2min (Real const r)
	min chi2 for picking rotamers of YFH More...
void	include_trp (bool const b)
	include TRP ? More...
virtual void	apply (Pose const &pose, PackerTask &task) const
	apply More...
void	parse_tag (TagPtr tag)
	Used to parse an xml-like tag to load parameters and properties. More...
void	parse_def (utility::lua::LuaObject const &def)
Public Member Functions inherited from core::pack::task::operation::TaskOperation
virtual	~TaskOperation ()

Private Attributes
Real	chi2max_
	max chi2 for picking rotamers of YFH More...
Real	chi2min_
	min chi2 for picking rotamers of YFH More...
bool	include_trp_
	include TRP ? ( default false ) More...

Detailed Description

Definition at line 129 of file LimitAromaChi2Operation.hh.

Member Typedef Documentation

typedef core::pack::task::PackerTask protocols::toolbox::task_operations::LimitAromaChi2Operation::PackerTask

Definition at line 135 of file LimitAromaChi2Operation.hh.

typedef TaskOperation protocols::toolbox::task_operations::LimitAromaChi2Operation::parent

Definition at line 138 of file LimitAromaChi2Operation.hh.

typedef core::pose::Pose protocols::toolbox::task_operations::LimitAromaChi2Operation::Pose

Definition at line 134 of file LimitAromaChi2Operation.hh.

typedef core::Real protocols::toolbox::task_operations::LimitAromaChi2Operation::Real

Definition at line 133 of file LimitAromaChi2Operation.hh.

typedef utility::tag::TagPtr protocols::toolbox::task_operations::LimitAromaChi2Operation::TagPtr

Definition at line 139 of file LimitAromaChi2Operation.hh.

typedef core::pack::task::operation::TaskOperation protocols::toolbox::task_operations::LimitAromaChi2Operation::TaskOperation

Definition at line 136 of file LimitAromaChi2Operation.hh.

typedef core::pack::task::operation::TaskOperationOP protocols::toolbox::task_operations::LimitAromaChi2Operation::TaskOperationOP

Definition at line 137 of file LimitAromaChi2Operation.hh.

Constructor & Destructor Documentation

protocols::toolbox::task_operations::LimitAromaChi2Operation::LimitAromaChi2Operation

(

)

default constructor

defauot constructor

Definition at line 124 of file LimitAromaChi2Operation.cc.

Referenced by clone().

protocols::toolbox::task_operations::LimitAromaChi2Operation::~LimitAromaChi2Operation ( )

virtual

destructor

Definition at line 132 of file LimitAromaChi2Operation.cc.

Member Function Documentation

void protocols::toolbox::task_operations::LimitAromaChi2Operation::apply ( Pose const &  pose, PackerTask &  task  ) const

virtual

apply

Implements core::pack::task::operation::TaskOperation.

Definition at line 143 of file LimitAromaChi2Operation.cc.

References core::pack::task::PackerTask::append_rotamerset_operation(), chi2max_, chi2min_, and include_trp_.

Referenced by protocols::relax::FastRelax::apply().

Real protocols::toolbox::task_operations::LimitAromaChi2Operation::chi2max ( ) const

inline

max chi2 for picking rotamers of YFH

Definition at line 158 of file LimitAromaChi2Operation.hh.

References chi2max_.

Referenced by parse_def(), and parse_tag().

void protocols::toolbox::task_operations::LimitAromaChi2Operation::chi2max ( Real const  r)

inline

max chi2 for picking rotamers of YFH

Definition at line 180 of file LimitAromaChi2Operation.hh.

References chi2max_.

Real protocols::toolbox::task_operations::LimitAromaChi2Operation::chi2min ( ) const

inline

min chi2 for picking rotamers of YFH

Definition at line 164 of file LimitAromaChi2Operation.hh.

References chi2min_.

Referenced by parse_def(), and parse_tag().

void protocols::toolbox::task_operations::LimitAromaChi2Operation::chi2min ( Real const  r)

inline

min chi2 for picking rotamers of YFH

Definition at line 186 of file LimitAromaChi2Operation.hh.

References chi2min_.

core::pack::task::operation::TaskOperationOP protocols::toolbox::task_operations::LimitAromaChi2Operation::clone ( ) const

virtual

make clone

clone

Implements core::pack::task::operation::TaskOperation.

Definition at line 136 of file LimitAromaChi2Operation.cc.

References LimitAromaChi2Operation().

bool protocols::toolbox::task_operations::LimitAromaChi2Operation::include_trp ( ) const

inline

include TRP ?

Definition at line 170 of file LimitAromaChi2Operation.hh.

References include_trp_.

Referenced by parse_tag().

void protocols::toolbox::task_operations::LimitAromaChi2Operation::include_trp ( bool const  b)

inline

include TRP ?

Definition at line 192 of file LimitAromaChi2Operation.hh.

References protocols::match::upstream::b, and include_trp_.

void protocols::toolbox::task_operations::LimitAromaChi2Operation::parse_def ( utility::lua::LuaObject const &  def)

virtual

Reimplemented from core::pack::task::operation::TaskOperation.

Definition at line 159 of file LimitAromaChi2Operation.cc.

References chi2max(), and chi2min().

void protocols::toolbox::task_operations::LimitAromaChi2Operation::parse_tag ( TagPtr  tag)

virtual

Used to parse an xml-like tag to load parameters and properties.

Reimplemented from core::pack::task::operation::TaskOperation.

Definition at line 151 of file LimitAromaChi2Operation.cc.

References chi2max(), chi2min(), and include_trp().

Member Data Documentation

Real protocols::toolbox::task_operations::LimitAromaChi2Operation::chi2max_

private

max chi2 for picking rotamers of YFH

Definition at line 217 of file LimitAromaChi2Operation.hh.

Referenced by apply(), and chi2max().

Real protocols::toolbox::task_operations::LimitAromaChi2Operation::chi2min_

private

min chi2 for picking rotamers of YFH

Definition at line 220 of file LimitAromaChi2Operation.hh.

Referenced by apply(), and chi2min().

bool protocols::toolbox::task_operations::LimitAromaChi2Operation::include_trp_

private

include TRP ? ( default false )

Definition at line 223 of file LimitAromaChi2Operation.hh.

Referenced by apply(), and include_trp().

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The documentation for this class was generated from the following files:

• src/protocols/toolbox/task_operations/LimitAromaChi2Operation.hh
• src/protocols/toolbox/task_operations/LimitAromaChi2Operation.cc