ddGData.cc File Reference

#include <core/types.hh>
#include <core/chemical/AA.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/pose/Pose.hh>
#include <core/io/silent/SilentStruct.hh>
#include <core/io/silent/SilentFileData.hh>
#include <numeric/random/random.hh>
#include <protocols/ddg/ddGData.hh>
#include <utility/exit.hh>
#include <utility/file/FileName.hh>
#include <utility/io/izstream.hh>
#include <utility/string_util.hh>
#include <cstdlib>
#include <fstream>
#include <iostream>
#include <string>
#include <core/import_pose/import_pose.hh>
#include <utility/vector1.hh>

Go to the source code of this file.

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::ddG

Constant Groups
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::ddG

Functions
numeric::random::RandomGenerator	RG (1907465)

Detailed Description

Author

Liz Kellogg ekell.nosp@m.ogg@.nosp@m.u.was.nosp@m.hing.nosp@m.ton.e.nosp@m.du

Definition in file ddGData.cc.

Function Documentation

numeric::random::RandomGenerator RG

(

1907465

)

Referenced by protocols::loophash::MPI_LoopHashRefine_Master::add_relax_batch(), protocols::loophash::LoopHashMoverWrapper::apply(), protocols::ligand_docking::CompoundTranslate::apply(), protocols::loophash::Mover_LoopHashRefine::apply(), protocols::ligand_docking::StartFrom::apply(), protocols::loophash::LoopHashLibrary::apply(), protocols::rigid::RigidBodyDofSeqTransMover::apply(), protocols::rigid::RigidBodyDofRandomTransMover::apply(), protocols::rigid::RigidBodyDofSeqPerturbMover::apply(), protocols::loophash::LoopHashSampler::build_structures(), protocols::ligand_docking::LigandBaseProtocol::choose_desired_centroid(), core::scoring::methods::RG_Energy::finalize_total_energy(), core::scoring::methods::RG_Energy_Fast::finalize_total_energy(), protocols::loophash::LoopHashLibrary::get_all(), protocols::jobdist::main_atom_tree_diff_mover(), protocols::jobdist::main_plain_mover(), protocols::jobdist::main_plain_pdb_mover(), protocols::ligand_docking::LigandDockProtocol::optimize_orientation3(), protocols::loops::loop_closure::kinematic_closure::TabooSamplingKinematicPerturber::refill_torsion_string_vector(), protocols::loops::loop_closure::kinematic_closure::NeighborDependentTabooSamplingKinematicPerturber::refill_torsion_string_vector(), core::import_pose::atom_tree_diffs::rms_error_with_noise(), and protocols::ligand_docking::Rotate::rotate_ligand().