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protocols::scoring::methods::pcs2::PcsGridSearchParameter Class Reference

#include <PcsGridSearchParameter.hh>

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Public Member Functions

 PcsGridSearchParameter ()
 
 ~PcsGridSearchParameter ()
 
PcsGridSearchParameter & operator= (PcsGridSearchParameter const &other)
 
 PcsGridSearchParameter (PcsGridSearchParameter const &other)
 
void control_grid_param ()
 This is to make sure the grid is correctly set up. More...
 

Public Attributes

core::Size include_only_start_stage1_
 
core::Size include_only_start_stage2_
 
core::Size include_only_start_stage3_
 
core::Size include_only_start_stage4_
 
core::Size include_only_end_stage1_
 
core::Size include_only_end_stage2_
 
core::Size include_only_end_stage3_
 
core::Size include_only_end_stage4_
 
core::Size n_trial_min_stage1_
 
core::Size n_trial_min_stage2_
 
core::Size n_trial_min_stage3_
 
core::Size n_trial_min_stage4_
 
core::Real pcs_weight_stage1_
 
core::Real pcs_weight_stage2_
 
core::Real pcs_weight_stage3_
 
core::Real pcs_weight_stage4_
 
core::Real individual_scale_stage1_
 
core::Real individual_scale_stage2_
 
core::Real individual_scale_stage3_
 
core::Real individual_scale_stage4_
 
utility::vector1< std::string > filenames_
 
utility::vector1< core::Real > individual_weights_
 

Friends

std::ostream & operator<< (std::ostream &out, const PcsGridSearchParameter &me)
 Print me. More...
 

Detailed Description

Definition at line 42 of file PcsGridSearchParameter.hh.

Constructor & Destructor Documentation

protocols::scoring::methods::pcs2::PcsGridSearchParameter::PcsGridSearchParameter ( )

Definition at line 134 of file PcsGridSearchParameter.cc.

protocols::scoring::methods::pcs2::PcsGridSearchParameter::~PcsGridSearchParameter ( )

Definition at line 62 of file PcsGridSearchParameter.cc.

protocols::scoring::methods::pcs2::PcsGridSearchParameter::PcsGridSearchParameter ( PcsGridSearchParameter const &  other)

Definition at line 101 of file PcsGridSearchParameter.cc.

References filenames_, include_only_end_stage1_, include_only_end_stage2_, include_only_end_stage3_, include_only_end_stage4_, include_only_start_stage1_, include_only_start_stage2_, include_only_start_stage3_, include_only_start_stage4_, individual_scale_stage1_, individual_scale_stage2_, individual_scale_stage3_, individual_scale_stage4_, individual_weights_, n_trial_min_stage1_, n_trial_min_stage2_, n_trial_min_stage3_, n_trial_min_stage4_, pcs_weight_stage1_, pcs_weight_stage2_, pcs_weight_stage3_, and pcs_weight_stage4_.

Member Function Documentation

void protocols::scoring::methods::pcs2::PcsGridSearchParameter::control_grid_param ( )

This is to make sure the grid is correctly set up.

Definition at line 231 of file PcsGridSearchParameter.cc.

References protocols::scoring::methods::pcs2::output_error_message(), and protocols::scoring::methods::pcs2::valide_include_only_stage().

Referenced by protocols::topology_broker::PcsEnergyController::init_after_reading().

PcsGridSearchParameter & protocols::scoring::methods::pcs2::PcsGridSearchParameter::operator= ( PcsGridSearchParameter const &  other)

Definition at line 66 of file PcsGridSearchParameter.cc.

References filenames_, include_only_end_stage1_, include_only_end_stage2_, include_only_end_stage3_, include_only_end_stage4_, include_only_start_stage1_, include_only_start_stage2_, include_only_start_stage3_, include_only_start_stage4_, individual_scale_stage1_, individual_scale_stage2_, individual_scale_stage3_, individual_scale_stage4_, individual_weights_, n_trial_min_stage1_, n_trial_min_stage2_, n_trial_min_stage3_, n_trial_min_stage4_, pcs_weight_stage1_, pcs_weight_stage2_, pcs_weight_stage3_, and pcs_weight_stage4_.

Friends And Related Function Documentation

std::ostream& operator<< ( std::ostream &  out,
const PcsGridSearchParameter &  me 
)
friend

Print me.

Definition at line 165 of file PcsGridSearchParameter.cc.

Member Data Documentation

utility::vector1<std::string> protocols::scoring::methods::pcs2::PcsGridSearchParameter::filenames_

Definition at line 72 of file PcsGridSearchParameter.hh.

Referenced by protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Size protocols::scoring::methods::pcs2::PcsGridSearchParameter::include_only_end_stage1_

Definition at line 52 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Size protocols::scoring::methods::pcs2::PcsGridSearchParameter::include_only_end_stage2_

Definition at line 53 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Size protocols::scoring::methods::pcs2::PcsGridSearchParameter::include_only_end_stage3_

Definition at line 54 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Size protocols::scoring::methods::pcs2::PcsGridSearchParameter::include_only_end_stage4_

Definition at line 55 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Size protocols::scoring::methods::pcs2::PcsGridSearchParameter::include_only_start_stage1_

Definition at line 47 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Size protocols::scoring::methods::pcs2::PcsGridSearchParameter::include_only_start_stage2_

Definition at line 48 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Size protocols::scoring::methods::pcs2::PcsGridSearchParameter::include_only_start_stage3_

Definition at line 49 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Size protocols::scoring::methods::pcs2::PcsGridSearchParameter::include_only_start_stage4_

Definition at line 50 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Real protocols::scoring::methods::pcs2::PcsGridSearchParameter::individual_scale_stage1_

Definition at line 67 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Real protocols::scoring::methods::pcs2::PcsGridSearchParameter::individual_scale_stage2_

Definition at line 68 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Real protocols::scoring::methods::pcs2::PcsGridSearchParameter::individual_scale_stage3_

Definition at line 69 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Real protocols::scoring::methods::pcs2::PcsGridSearchParameter::individual_scale_stage4_

Definition at line 70 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

utility::vector1<core::Real> protocols::scoring::methods::pcs2::PcsGridSearchParameter::individual_weights_

Definition at line 73 of file PcsGridSearchParameter.hh.

Referenced by protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Size protocols::scoring::methods::pcs2::PcsGridSearchParameter::n_trial_min_stage1_

Definition at line 57 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Size protocols::scoring::methods::pcs2::PcsGridSearchParameter::n_trial_min_stage2_

Definition at line 58 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Size protocols::scoring::methods::pcs2::PcsGridSearchParameter::n_trial_min_stage3_

Definition at line 59 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Size protocols::scoring::methods::pcs2::PcsGridSearchParameter::n_trial_min_stage4_

Definition at line 60 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Real protocols::scoring::methods::pcs2::PcsGridSearchParameter::pcs_weight_stage1_

Definition at line 62 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Real protocols::scoring::methods::pcs2::PcsGridSearchParameter::pcs_weight_stage2_

Definition at line 63 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Real protocols::scoring::methods::pcs2::PcsGridSearchParameter::pcs_weight_stage3_

Definition at line 64 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

core::Real protocols::scoring::methods::pcs2::PcsGridSearchParameter::pcs_weight_stage4_

Definition at line 65 of file PcsGridSearchParameter.hh.

Referenced by protocols::topology_broker::PcsEnergyController::add_mover(), protocols::scoring::methods::pcs2::operator<<(), operator=(), and PcsGridSearchParameter().

The documentation for this class was generated from the following files:
Generated on Sat Jun 1 2013 12:51:23 for Rosetta 3.5 by   doxygen 1.8.4