protocols::toolbox::task_operations::ProteinCore Class Reference

#include <ProteinCoreResFilter.hh>

Inheritance diagram for protocols::toolbox::task_operations::ProteinCore:

Collaboration diagram for protocols::toolbox::task_operations::ProteinCore:

Public Member Functions
	ProteinCore ()
virtual bool	operator() (Pose const &, Size) const
virtual core::pack::task::operation::ResFilterOP	clone () const
virtual void	parse_tag (TagPtr)
	parser xml-like tags to set class data/parameters More...

Private Attributes
core::Real	distance_threshold_
core::Size	neighbor_cutoff_
bool	bound_
core::Size	jump_
core::Size	neighbor_count_cutoff_

Additional Inherited Members
Public Types inherited from core::pack::task::operation::ResFilter
typedef pose::Pose	Pose
typedef utility::tag::TagPtr	TagPtr

Detailed Description

Definition at line 31 of file ProteinCoreResFilter.hh.

Constructor & Destructor Documentation

protocols::toolbox::task_operations::ProteinCore::ProteinCore

(

)

Definition at line 35 of file ProteinCoreResFilter.cc.

Referenced by clone().

Member Function Documentation

virtual core::pack::task::operation::ResFilterOP protocols::toolbox::task_operations::ProteinCore::clone ( ) const

inlinevirtual

Implements core::pack::task::operation::ResFilter.

Definition at line 35 of file ProteinCoreResFilter.hh.

References ProteinCore().

bool protocols::toolbox::task_operations::ProteinCore::operator() ( Pose const &  pose, core::Size  index  ) const

virtual

Implements core::pack::task::operation::ResFilter.

Definition at line 56 of file ProteinCoreResFilter.cc.

References protocols::simple_filters::NonSequentialNeighborsFilter::bound(), bound_, protocols::simple_filters::NonSequentialNeighborsFilter::compute(), protocols::simple_filters::NonSequentialNeighborsFilter::distance_threshold(), distance_threshold_, protocols::simple_filters::NonSequentialNeighborsFilter::jump(), jump_, protocols::sic_dock::neighbor_count(), neighbor_count_cutoff_, protocols::simple_filters::NonSequentialNeighborsFilter::neighbor_cutoff(), neighbor_cutoff_, and protocols::simple_filters::NonSequentialNeighborsFilter::resnum().

void protocols::toolbox::task_operations::ProteinCore::parse_tag ( TagPtr  )

virtual

parser xml-like tags to set class data/parameters

Reimplemented from core::pack::task::operation::ResFilter.

Definition at line 45 of file ProteinCoreResFilter.cc.

References bound_, distance_threshold_, jump_, neighbor_count_cutoff_, neighbor_cutoff_, and protocols::TR().

Member Data Documentation

bool protocols::toolbox::task_operations::ProteinCore::bound_

private

Definition at line 40 of file ProteinCoreResFilter.hh.

Referenced by operator()(), and parse_tag().

core::Real protocols::toolbox::task_operations::ProteinCore::distance_threshold_

private

Definition at line 38 of file ProteinCoreResFilter.hh.

Referenced by operator()(), and parse_tag().

core::Size protocols::toolbox::task_operations::ProteinCore::jump_

private

Definition at line 41 of file ProteinCoreResFilter.hh.

Referenced by operator()(), and parse_tag().

core::Size protocols::toolbox::task_operations::ProteinCore::neighbor_count_cutoff_

private

Definition at line 42 of file ProteinCoreResFilter.hh.

Referenced by operator()(), and parse_tag().

core::Size protocols::toolbox::task_operations::ProteinCore::neighbor_cutoff_

private

Definition at line 39 of file ProteinCoreResFilter.hh.

Referenced by operator()(), and parse_tag().

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The documentation for this class was generated from the following files:

• src/protocols/toolbox/task_operations/ProteinCoreResFilter.hh
• src/protocols/toolbox/task_operations/ProteinCoreResFilter.cc