| add_design_task(DesignTaskOP const design_task) | protocols::flxbb::FlxbbDesign | |
| apply(Pose &pose) | protocols::flxbb::FlxbbDesign | virtual |
| protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
| BluePrint typedef | protocols::flxbb::FlxbbDesign | |
| blueprint_ | protocols::flxbb::FlxbbDesign | private |
| BluePrintOP typedef | protocols::flxbb::FlxbbDesign | |
| build_design_taskset(Pose const &pose) | protocols::flxbb::FlxbbDesign | private |
| clear_all_residues_ | protocols::flxbb::FlxbbDesign | private |
| clear_design_taskset() | protocols::flxbb::FlxbbDesign | |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clone() const | protocols::flxbb::FlxbbDesign | virtual |
| constraints_NtoC_ | protocols::flxbb::FlxbbDesign | private |
| constraints_sheet_ | protocols::flxbb::FlxbbDesign | private |
| create() | protocols::moves::Mover | virtual |
| DataMap typedef | protocols::flxbb::FlxbbDesign | |
| design_taskset_ | protocols::flxbb::FlxbbDesign | private |
| DesignTaskOP typedef | protocols::flxbb::FlxbbDesign | |
| DesignTaskSet typedef | protocols::flxbb::FlxbbDesign | |
| filter_during_design_ | protocols::flxbb::FlxbbDesign | private |
| Filters_map typedef | protocols::flxbb::FlxbbDesign | |
| FlxbbDesign() | protocols::flxbb::FlxbbDesign | |
| FlxbbDesign(ScoreFunctionOP const sfxnd, ScoreFunctionOP const sfxnr, Size const ncycle=3, String const layer_mode="", bool const use_origseq_for_not_dsgned_layer=true, bool const no_relax=false) | protocols::flxbb::FlxbbDesign | |
| FlxbbDesign(FlxbbDesign const &rval) | protocols::flxbb::FlxbbDesign | |
| fresh_instance() const | protocols::flxbb::FlxbbDesign | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_movemap_from_blueprint(Pose const &pose, BluePrintOP const blueprint) | protocols::flxbb::FlxbbDesign | private |
| get_name() const | protocols::flxbb::FlxbbDesign | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_type() const | protocols::moves::Mover | inline |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| initialize_filter(Size const filter_trial, String const &filter_type) | protocols::flxbb::FlxbbDesign | |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| layer_mode_ | protocols::flxbb::FlxbbDesign | private |
| limit_aroma_chi2_ | protocols::flxbb::FlxbbDesign | private |
| movemap_ | protocols::flxbb::FlxbbDesign | private |
| movemap_from_blueprint(bool const value) | protocols::flxbb::FlxbbDesign | |
| movemap_from_blueprint_ | protocols::flxbb::FlxbbDesign | private |
| MoveMapOP typedef | protocols::flxbb::FlxbbDesign | |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| Mover(Mover const &other) | protocols::moves::Mover | |
| MoverOP typedef | protocols::flxbb::FlxbbDesign | |
| Movers_map typedef | protocols::flxbb::FlxbbDesign | |
| name() | protocols::moves::Mover | inlinestatic |
| nflxbb_cycles_ | protocols::flxbb::FlxbbDesign | private |
| no_design(bool const no_design) | protocols::flxbb::FlxbbDesign | |
| no_design_ | protocols::flxbb::FlxbbDesign | private |
| no_relax(bool const no_relax) | protocols::flxbb::FlxbbDesign | |
| no_relax_ | protocols::flxbb::FlxbbDesign | private |
| operator=(Mover const &other) | protocols::moves::Mover | |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
| parse_my_tag(TagPtr const tag, DataMap &data, Filters_map const &, Movers_map const &, Pose const &) | protocols::flxbb::FlxbbDesign | virtual |
| parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
| Pose typedef | protocols::flxbb::FlxbbDesign | |
| PoseCOP typedef | protocols::moves::Mover | |
| read_options() | protocols::flxbb::FlxbbDesign | |
| Real typedef | protocols::flxbb::FlxbbDesign | |
| register_options() | protocols::flxbb::FlxbbDesign | static |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| relax_constraint_to_design_ | protocols::flxbb::FlxbbDesign | private |
| reset_status() | protocols::moves::Mover | |
| resfile_ | protocols::flxbb::FlxbbDesign | private |
| save_state(SerializableState &state) | protocols::moves::Mover | virtual |
| ScoreFunction typedef | protocols::flxbb::FlxbbDesign | |
| ScoreFunctionOP typedef | protocols::flxbb::FlxbbDesign | |
| scorefxn_design_ | protocols::flxbb::FlxbbDesign | private |
| scorefxn_relax_ | protocols::flxbb::FlxbbDesign | private |
| set_blueprint(BluePrintOP const blueprint) | protocols::flxbb::FlxbbDesign | |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inline |
| set_design_taskset(DesignTaskSet const &design_taskset) | protocols::flxbb::FlxbbDesign | |
| set_filter_during_design(FilterStructsOP const filter_during_design) | protocols::flxbb::FlxbbDesign | |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_layer_mode(String const &layer_mode) | protocols::flxbb::FlxbbDesign | |
| set_movemap(MoveMapOP const movemap) | protocols::flxbb::FlxbbDesign | |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_ncycles(Size const ncycles) | protocols::flxbb::FlxbbDesign | |
| set_scorefxn_design(ScoreFunctionOP const scorefxn) | protocols::flxbb::FlxbbDesign | |
| set_scorefxn_relax(ScoreFunctionOP const scorefxn) | protocols::flxbb::FlxbbDesign | |
| set_weight_constraints_NtoC(Real const value) | protocols::flxbb::FlxbbDesign | |
| set_weight_constraints_sheet(Real const value) | protocols::flxbb::FlxbbDesign | |
| Size typedef | protocols::flxbb::FlxbbDesign | |
| String typedef | protocols::flxbb::FlxbbDesign | |
| Strings typedef | protocols::moves::Mover | |
| Super typedef | protocols::flxbb::FlxbbDesign | |
| TagPtr typedef | protocols::flxbb::FlxbbDesign | |
| task_operations_ | protocols::flxbb::FlxbbDesign | private |
| TaskOperation typedef | protocols::flxbb::FlxbbDesign | |
| TaskOperationOP typedef | protocols::flxbb::FlxbbDesign | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| type() const | protocols::moves::Mover | inline |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| use_fast_relax_ | protocols::flxbb::FlxbbDesign | private |
| use_origseq_for_not_dsgned_layer(bool const use) | protocols::flxbb::FlxbbDesign | |
| use_origseq_for_not_dsgned_layer_ | protocols::flxbb::FlxbbDesign | private |
| ~FlxbbDesign() | protocols::flxbb::FlxbbDesign | virtual |
| ~Mover() | protocols::moves::Mover | virtual |
1.8.4