BatchFeatures.hh

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// -*- mode:c++;tab-width:2;indent-tabs-mode:t;show-trailing-whitespace:t;rm-trailing-spaces:t -*-
// vi: set ts=2 noet;
//
// (c) Copyright Rosetta Commons Member Institutions.
// (c) This file is part of the Rosetta software suite and is made available under license.
// (c) The Rosetta software is developed by the contributing members of the Rosetta Commons.
// (c) For more information, see http://www.rosettacommons.org. Questions about this can be
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/// @file protocols/features/BatchFeatures.hh
///
/// @brief
/// @author Tim Jacobs

#ifndef INCLUDED_protocols_features_BatchFeatures_HH
#define INCLUDED_protocols_features_BatchFeatures_HH

// Unit Headers
#include <protocols/features/FeaturesReporter.hh>
#include <protocols/features/BatchFeatures.fwd.hh>

// Project Headers
#include <core/types.hh>
#include <utility/vector1.fwd.hh>
#include <utility/exit.hh>

// C++ Headers
#include <string>

#include <utility/vector1.hh>

namespace protocols{
namespace features{

class BatchFeatures : public protocols::features::FeaturesReporter {
public:
  BatchFeatures();

  BatchFeatures( BatchFeatures const & src );

  virtual ~BatchFeatures();

  ///@brief return string with class name
  std::string
  type_name() const;

  ///@brief generate the table schemas and write them to the database
  virtual void
  write_schema_to_db(utility::sql_database::sessionOP db_session) const;

  ///@brief return the set of features reporters that are required to
  ///also already be extracted by the time this one is used.
  utility::vector1<std::string>
  features_reporter_dependencies() const;

  ///@brief return sql statements that setup helpful indices on the tables
  std::string
  indices() const;

  ///@brief return sql statments that add indexes check invariants etc.
  //std::string cleanup() const;

  core::Size
  report_features(
    core::Size batch_id,
    core::Size protocol_id,
    std::string name,
    std::string description,
    utility::sql_database::sessionOP db_session);

  core::Size
  report_features(
    core::pose::Pose const &,
    utility::vector1< bool > const &,
    boost::uuids::uuid,
    utility::sql_database::sessionOP){
    utility_exit_with_message(
      "The batch features reporter is a special feature reporter that "
      "represents a set of features extracted at once. Please use the other "
      "interface for report_features");
    return 0;
  }

};

} // features namespace
} // protocols namespace

#endif