| add_mainchain_segments(utility::vector1< core::id::AtomID > atomids, core::Size min_atoms, core::Size max_atoms) | protocols::backrub::BackrubMover | |
| add_mainchain_segments(utility::vector1< core::Size > resnums, utility::vector1< std::string > atomnames, core::Size min_atoms, core::Size max_atoms) | protocols::backrub::BackrubMover | |
| add_mainchain_segments() | protocols::backrub::BackrubMover | |
| add_mainchain_segments_from_options() | protocols::backrub::BackrubMover | |
| add_segment(core::id::AtomID start_atomid, core::id::AtomID end_atomid, core::Real max_angle_disp=0) | protocols::backrub::BackrubMover | |
| apply(Pose &pose) | protocols::backrub::BackrubMover | virtual |
| protocols::canonical_sampling::ThermodynamicMover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
| BackrubMover() | protocols::backrub::BackrubMover | |
| BackrubMover(BackrubMover const &mover) | protocols::backrub::BackrubMover | |
| bond_angle_map_ | protocols::backrub::BackrubMover | private |
| branchopt() | protocols::backrub::BackrubMover | inline |
| branchopt_ | protocols::backrub::BackrubMover | private |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clear_segments() | protocols::backrub::BackrubMover | inline |
| clone() const | protocols::backrub::BackrubMover | virtual |
| create() | protocols::moves::Mover | virtual |
| dof_id_ranges(core::pose::Pose &pose) | protocols::backrub::BackrubMover | virtual |
| Filters_map typedef | protocols::moves::Mover | |
| finalize_simulation(core::pose::Pose &pose, protocols::canonical_sampling::MetropolisHastingsMover const &metropolis_hastings_mover) | protocols::canonical_sampling::ThermodynamicMover | virtual |
| fresh_instance() const | protocols::backrub::BackrubMover | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_name() const | protocols::backrub::BackrubMover | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_type() const | protocols::moves::Mover | inline |
| has_segment(core::id::AtomID start_atomid, core::id::AtomID end_atomid) | protocols::backrub::BackrubMover | inline |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| init_with_options() | protocols::backrub::BackrubMover | |
| initialize_simulation(core::pose::Pose &pose, protocols::canonical_sampling::MetropolisHastingsMover const &metropolis_hastings_mover, core::Size cycle) | protocols::backrub::BackrubMover | virtual |
| is_multi_trial() | protocols::canonical_sampling::ThermodynamicMover | virtual |
| last_angle() const | protocols::backrub::BackrubMover | |
| last_angle_ | protocols::backrub::BackrubMover | private |
| last_end_atom_name() const | protocols::backrub::BackrubMover | |
| last_end_atom_name_ | protocols::backrub::BackrubMover | private |
| last_inner_score_temperature_delta() | protocols::canonical_sampling::ThermodynamicMover | virtual |
| last_proposal_density_ratio() | protocols::canonical_sampling::ThermodynamicMover | virtual |
| last_segment_id() const | protocols::backrub::BackrubMover | |
| last_segment_id_ | protocols::backrub::BackrubMover | private |
| last_start_atom_name() const | protocols::backrub::BackrubMover | |
| last_start_atom_name_ | protocols::backrub::BackrubMover | private |
| max_angle_disp_4() const | protocols::backrub::BackrubMover | |
| max_angle_disp_4_ | protocols::backrub::BackrubMover | private |
| max_angle_disp_7() const | protocols::backrub::BackrubMover | |
| max_angle_disp_7_ | protocols::backrub::BackrubMover | private |
| max_angle_disp_slope() const | protocols::backrub::BackrubMover | |
| max_angle_disp_slope_ | protocols::backrub::BackrubMover | private |
| max_atoms() const | protocols::backrub::BackrubMover | |
| max_atoms_ | protocols::backrub::BackrubMover | private |
| metropolis_hastings_mover() | protocols::canonical_sampling::ThermodynamicMover | virtual |
| min_atoms() const | protocols::backrub::BackrubMover | |
| min_atoms_ | protocols::backrub::BackrubMover | private |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| Mover(Mover const &other) | protocols::moves::Mover | |
| name() | protocols::moves::Mover | inlinestatic |
| next_segment_id() const | protocols::backrub::BackrubMover | |
| next_segment_id_ | protocols::backrub::BackrubMover | private |
| num_segments() | protocols::backrub::BackrubMover | inline |
| observe_after_metropolis(protocols::canonical_sampling::MetropolisHastingsMover const &metropolis_hastings_mover) | protocols::canonical_sampling::ThermodynamicMover | virtual |
| operator=(Mover const &other) | protocols::moves::Mover | |
| optimize_branch_angles(Pose &pose) | protocols::backrub::BackrubMover | |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
| parse_my_tag(utility::tag::TagPtr const tag, protocols::moves::DataMap &data, protocols::filters::Filters_map const &filters, protocols::moves::Movers_map const &movers, core::pose::Pose const &pose) | protocols::backrub::BackrubMover | virtual |
| parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
| pivot_atoms() const | protocols::backrub::BackrubMover | |
| pivot_atoms_ | protocols::backrub::BackrubMover | private |
| pivot_residues() const | protocols::backrub::BackrubMover | |
| pivot_residues_ | protocols::backrub::BackrubMover | private |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| preserve_detailed_balance() const | protocols::backrub::BackrubMover | virtual |
| preserve_detailed_balance_ | protocols::backrub::BackrubMover | private |
| random_angle(Pose &pose, Size segment_id, utility::vector0< core::Real > &start_constants, utility::vector0< core::Real > &end_constants) | protocols::backrub::BackrubMover | |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| require_mm_bend() const | protocols::backrub::BackrubMover | |
| require_mm_bend_ | protocols::backrub::BackrubMover | private |
| reset_status() | protocols::moves::Mover | |
| rotate_segment(Pose &pose, Size segment_id, core::Real angle, utility::vector0< core::Real > &start_constants, utility::vector0< core::Real > &end_constants) | protocols::backrub::BackrubMover | |
| save_state(SerializableState &state) | protocols::moves::Mover | virtual |
| segment(core::Size segment_id) | protocols::backrub::BackrubMover | inline |
| segment_id(core::id::AtomID start_atomid, core::id::AtomID end_atomid) | protocols::backrub::BackrubMover | inline |
| segments_ | protocols::backrub::BackrubMover | private |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inline |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_max_angle_disp_4(core::Real max_angle_disp_4) | protocols::backrub::BackrubMover | |
| set_max_angle_disp_7(core::Real max_angle_disp_7) | protocols::backrub::BackrubMover | |
| set_max_angle_disp_slope(core::Real max_angle_disp_slope) | protocols::backrub::BackrubMover | |
| set_max_atoms(core::Size max_atoms) | protocols::backrub::BackrubMover | |
| set_metropolis_hastings_mover(protocols::canonical_sampling::MetropolisHastingsMoverAP metropolis_hastings_mover) | protocols::canonical_sampling::ThermodynamicMover | virtual |
| set_min_atoms(core::Size min_atoms) | protocols::backrub::BackrubMover | |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_next_segment_id(core::Size next_segment_id) | protocols::backrub::BackrubMover | |
| set_pivot_atoms(utility::vector1< std::string > const &pivot_atoms) | protocols::backrub::BackrubMover | |
| set_pivot_residues(utility::vector1< core::Size > const &pivot_residues) | protocols::backrub::BackrubMover | |
| set_preserve_detailed_balance(bool preserve_detailed_balance) | protocols::backrub::BackrubMover | virtual |
| set_require_mm_bend(bool require_mm_bend) | protocols::backrub::BackrubMover | |
| Strings typedef | protocols::moves::Mover | |
| TagPtr typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| ThermodynamicMover() | protocols::canonical_sampling::ThermodynamicMover | |
| torsion_id_ranges(core::pose::Pose &pose) | protocols::backrub::BackrubMover | virtual |
| type() const | protocols::moves::Mover | inline |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| update_type() | protocols::backrub::BackrubMover | |
| ~Mover() | protocols::moves::Mover | virtual |
| ~ThermodynamicMover() | protocols::canonical_sampling::ThermodynamicMover | virtual |
1.8.4