core::pack::rotamer_set::RotamerSet_ Member List

This is the complete list of members for core::pack::rotamer_set::RotamerSet_, including all inherited members.

add_rotamer(conformation::Residue const &rotamer)	core::pack::rotamer_set::RotamerSet_	virtual
BasicDataCache typedef	core::conformation::RotamerSetBase
BasicDataCacheOP typedef	core::conformation::RotamerSetBase
begin() const	core::pack::rotamer_set::RotamerSet_	inlinevirtual
build_dependent_rotamers(RotamerSets const &rotamer_sets, pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, graph::GraphCOP packer_neighbor_graph)	core::pack::rotamer_set::RotamerSet_	virtual
build_dependent_rotamers_for_concrete(RotamerSets const &rotamer_sets, pose::Pose const &pose, scoring::ScoreFunction const &, task::PackerTask const &task, conformation::Residue const &existing_residue, chemical::ResidueTypeCOP concrete_residue, graph::GraphCOP packer_neighbor_graph)	core::pack::rotamer_set::RotamerSet_	protected
build_optimize_H_rotamers(pose::Pose const &pose, task::PackerTask const &task, chemical::ResidueTypeCOP concrete_residue, conformation::Residue const &existing_residue)	core::pack::rotamer_set::RotamerSet_	protected
build_rotamers(pose::Pose const &the_pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, graph::GraphCOP packer_neighbor_graph, bool use_neighbor_context=true)	core::pack::rotamer_set::RotamerSet_	virtual
build_rotamers_for_concrete(pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, chemical::ResidueTypeCOP concrete_residue, conformation::Residue const &existing_residue, graph::GraphCOP packer_neighbor_graph, bool use_neighbor_context=true)	core::pack::rotamer_set::RotamerSet_	protected
build_rotamers_for_concrete_virt(pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, chemical::ResidueTypeCOP concrete_residue, graph::GraphCOP packer_neighbor_graph, bool use_neighbor_context=true)	core::pack::rotamer_set::RotamerSet_	protectedvirtual
bump_check(ResidueCOP rotamer, scoring::ScoreFunction const &sf, pose::Pose const &pose, task::PackerTask const &task, graph::GraphCOP packer_neighbor_graph) const	core::pack::rotamer_set::RotamerSet_	virtual
bump_selector_	core::pack::rotamer_set::RotamerSet_	private
cached_tries_	core::pack::rotamer_set::RotamerSet_	private
ChiSetOP typedef	core::pack::rotamer_set::RotamerSet_
compute_one_body_energies(pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, graph::GraphCOP packer_neighbor_graph, utility::vector1< core::PackerEnergy > &energies) const	core::pack::rotamer_set::RotamerSet_	virtual
compute_one_body_energy_maps(pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, graph::GraphCOP packer_neighbor_graph, utility::vector1< scoring::EnergyMap > &energies) const	core::pack::rotamer_set::RotamerSet_	virtual
current_rotamer_copy_	core::pack::rotamer_set::RotamerSet_	private
data()	core::conformation::RotamerSetBase
data() const	core::conformation::RotamerSetBase
different_resgroup(core::chemical::ResidueType const &rt1, core::chemical::ResidueType const &rt2) const	core::pack::rotamer_set::RotamerSet_	private
different_restype(core::chemical::ResidueType const &rt1, core::chemical::ResidueType const &rt2) const	core::pack::rotamer_set::RotamerSet_	private
drop_rotamer(Size rot_id)	core::pack::rotamer_set::RotamerSet_	virtual
drop_rotamers(utility::vector1< bool > const &rotamers_to_delete)	core::pack::rotamer_set::RotamerSet_	virtual
drop_rotamers_by_index(utility::vector1< Size > const &rotamer_indices_to_delete)	core::pack::rotamer_set::RotamerSet_	virtual
end() const	core::pack::rotamer_set::RotamerSet_	inlinevirtual
get_n_residue_groups() const	core::pack::rotamer_set::RotamerSet_	virtual
get_n_residue_types() const	core::pack::rotamer_set::RotamerSet_	virtual
get_n_rotamers_for_residue_group(Size which_resgroup) const	core::pack::rotamer_set::RotamerSet_	virtual
get_n_rotamers_for_residue_type(Size which_resgroup) const	core::pack::rotamer_set::RotamerSet_	virtual
get_residue_group_begin(Size which_resgroup) const	core::pack::rotamer_set::RotamerSet_	virtual
get_residue_group_index_for_rotamer(Size which_rotamer) const	core::pack::rotamer_set::RotamerSet_	virtual
get_residue_type_begin(Size which_restype) const	core::pack::rotamer_set::RotamerSet_	virtual
get_residue_type_index_for_rotamer(Size which_rotamer) const	core::pack::rotamer_set::RotamerSet_	virtual
get_trie(Size method_enum_id) const	core::pack::rotamer_set::RotamerSet_	virtual
id_for_current_rotamer() const	core::pack::rotamer_set::RotamerSet_	virtual
id_for_current_rotamer_	core::pack::rotamer_set::RotamerSet_	mutableprivate
n_residue_groups_	core::pack::rotamer_set::RotamerSet_	mutableprivate
n_residue_types_	core::pack::rotamer_set::RotamerSet_	mutableprivate
n_rotamers_for_resgroup_	core::pack::rotamer_set::RotamerSet_	mutableprivate
n_rotamers_for_restype_	core::pack::rotamer_set::RotamerSet_	mutableprivate
new_residue_group()	core::pack::rotamer_set::RotamerSet_	private
new_residue_type()	core::pack::rotamer_set::RotamerSet_	private
nonconst_rotamer(Size rot_id)	core::pack::rotamer_set::RotamerSet_	virtual
num_rotamers() const	core::pack::rotamer_set::RotamerSet_	virtual
prepare_for_new_residue_type(core::chemical::ResidueType const &restype)	core::pack::rotamer_set::RotamerSet_	private
push_back_rotamer(conformation::ResidueOP)	core::pack::rotamer_set::RotamerSet_	private
resid() const	core::pack::rotamer_set::RotamerSet	inlinevirtual
residue_group_for_rotamers_	core::pack::rotamer_set::RotamerSet_	mutableprivate
residue_group_rotamers_begin_	core::pack::rotamer_set::RotamerSet_	mutableprivate
residue_type_for_rotamers_	core::pack::rotamer_set::RotamerSet_	mutableprivate
residue_type_rotamers_begin_	core::pack::rotamer_set::RotamerSet_	mutableprivate
ResidueCOP typedef	core::pack::rotamer_set::RotamerSet_
ResidueOP typedef	core::pack::rotamer_set::RotamerSet_
rotamer(Size rot_id) const	core::pack::rotamer_set::RotamerSet_	virtual
rotamer_offsets_require_update_	core::pack::rotamer_set::RotamerSet_	mutableprivate
rotamers_	core::pack::rotamer_set::RotamerSet_	private
RotamerSet()	core::pack::rotamer_set::RotamerSet
RotamerSet_()	core::pack::rotamer_set::RotamerSet_
RotamerSet_(RotamerSet_ const &)	core::pack::rotamer_set::RotamerSet_	private
RotamerSetBase()	core::conformation::RotamerSetBase
RotamerTrieBaseOP typedef	core::pack::rotamer_set::RotamerSet_
set_extra_samples(task::PackerTask const &task, int num_10A_neighbors, int chi, chemical::ResidueTypeCOP concrete_residue, utility::vector1< Real > &extra_chi_steps) const	core::pack::rotamer_set::RotamerSet_
set_resid(Size resid)	core::pack::rotamer_set::RotamerSet
store_trie(Size method_enum_id, conformation::AbstractRotamerTrieOP trie)	core::pack::rotamer_set::RotamerSet_	virtual
update_rotamer_offsets() const	core::pack::rotamer_set::RotamerSet_	private
~RotamerSet()	core::pack::rotamer_set::RotamerSet	virtual
~RotamerSet_()	core::pack::rotamer_set::RotamerSet_	virtual
~RotamerSetBase()	core::conformation::RotamerSetBase	virtual