protocols::qsar::scoring_grid Namespace Reference

Classes
class	AtrGrid
class	AtrGridCreator
struct	ChargeAtom
	a very light representation of an atom that is just a charge and a cartesian space position More...
class	ChargeGrid
class	ChargeGridCreator
class	ClassicGrid
class	ClassicGridCreator
class	GridBase
class	GridCreator
	Abstract class fora mover factory. The creator class is responsible for creating a particular mover class. More...
class	GridRegistrator
	this templated class will register an instance of a GridCreator (class T) with the GridFactory. It will ensure that no GridCreator is registered twice and centralizes the registration logic More...
class	GridFactory
class	GridInitMover
class	GridInitMoverCreator
class	GridManager
class	HbaGrid
class	HbaGridCreator
class	HbdGrid
class	HbdGridCreator
class	RepGrid
class	RepGridCreator
class	ScoringGridLoader
	A class for loading ScoringGrids into the XML parser's DataMap. More...
class	ScoringGridLoaderCreator
class	SingleGrid
class	SolvationGrid
class	SolvationGridCreator
class	SolvationMetaGrid
class	SolvationMetaGridCreator
class	VdwGrid
class	VdwGridCreator

Typedefs
typedef utility::pointer::owning_ptr < GridBase >	GridBaseOP
typedef utility::pointer::owning_ptr < GridBase const >	GridBaseCOP
typedef utility::pointer::owning_ptr < GridCreator >	GridCreatorOP
typedef utility::pointer::owning_ptr < GridCreator const >	GridCreatorCOP
typedef utility::pointer::owning_ptr < GridFactory >	GridFactoryOP
typedef utility::pointer::owning_ptr < GridFactory const >	GridFactoryCOP
typedef utility::pointer::owning_ptr < GridManager >	GridManagerOP
typedef utility::pointer::owning_ptr < GridManager const >	GridManagerCOP
typedef std::map< std::string, GridBaseOP >	GridMap
typedef std::map< std::string, core::Real >	ScoreMap
typedef utility::pointer::owning_ptr < ScoringGridLoader >	ScoringGridLoaderOP
typedef utility::pointer::owning_ptr < ScoringGridLoader const >	ScoringGridLoaderCOP
typedef utility::pointer::owning_ptr < SingleGrid >	SingleGridOP
typedef utility::pointer::owning_ptr < SingleGrid const >	SingleGridCOP
typedef utility::pointer::owning_ptr < SolvationGrid >	SolvationGridOP
typedef utility::pointer::owning_ptr < SolvationGrid const >	SolvationGridCOP

Functions
static basic::Tracer	GridManagerTracer ("protocols.qsar.scoring_grid.GridManager")
static basic::Tracer	RepGridTracer ("protocols.ligand_docking.scoring_grid.RepGrid")
static basic::Tracer	TR ("protocols.qsar.scoring_grid.ScoringGridLoader")
static basic::Tracer	GridBaseTracer ("protocols.qsar.scoring_grid.SingleGrid")

Typedef Documentation

typedef utility::pointer::owning_ptr<GridBase const> protocols::qsar::scoring_grid::GridBaseCOP

Definition at line 25 of file GridBase.fwd.hh.

typedef utility::pointer::owning_ptr<GridBase> protocols::qsar::scoring_grid::GridBaseOP

Definition at line 22 of file GridBase.fwd.hh.

typedef utility::pointer::owning_ptr<GridCreator const> protocols::qsar::scoring_grid::GridCreatorCOP

Definition at line 43 of file GridCreator.hh.

typedef utility::pointer::owning_ptr<GridCreator> protocols::qsar::scoring_grid::GridCreatorOP

Definition at line 42 of file GridCreator.hh.

typedef utility::pointer::owning_ptr<GridFactory const > protocols::qsar::scoring_grid::GridFactoryCOP

Definition at line 25 of file GridFactory.fwd.hh.

typedef utility::pointer::owning_ptr<GridFactory> protocols::qsar::scoring_grid::GridFactoryOP

Definition at line 22 of file GridFactory.fwd.hh.

typedef utility::pointer::owning_ptr<GridManager const> protocols::qsar::scoring_grid::GridManagerCOP

Definition at line 24 of file GridManager.fwd.hh.

typedef utility::pointer::owning_ptr<GridManager> protocols::qsar::scoring_grid::GridManagerOP

Definition at line 22 of file GridManager.fwd.hh.

typedef std::map<std::string,GridBaseOP> protocols::qsar::scoring_grid::GridMap

Definition at line 41 of file GridManager.hh.

typedef std::map<std::string,core::Real> protocols::qsar::scoring_grid::ScoreMap

Definition at line 42 of file GridManager.hh.

typedef utility::pointer::owning_ptr<ScoringGridLoader const > protocols::qsar::scoring_grid::ScoringGridLoaderCOP

Definition at line 25 of file ScoringGridLoader.fwd.hh.

typedef utility::pointer::owning_ptr<ScoringGridLoader> protocols::qsar::scoring_grid::ScoringGridLoaderOP

Definition at line 22 of file ScoringGridLoader.fwd.hh.

typedef utility::pointer::owning_ptr<SingleGrid const> protocols::qsar::scoring_grid::SingleGridCOP

Definition at line 25 of file SingleGrid.fwd.hh.

typedef utility::pointer::owning_ptr<SingleGrid> protocols::qsar::scoring_grid::SingleGridOP

Definition at line 22 of file SingleGrid.fwd.hh.

typedef utility::pointer::owning_ptr<SolvationGrid const> protocols::qsar::scoring_grid::SolvationGridCOP

Definition at line 26 of file SolvationGrid.fwd.hh.

typedef utility::pointer::owning_ptr<SolvationGrid> protocols::qsar::scoring_grid::SolvationGridOP

Definition at line 22 of file SolvationGrid.fwd.hh.

Function Documentation

static basic::Tracer protocols::qsar::scoring_grid::GridBaseTracer ( "protocols.qsar.scoring_grid.SingleGrid"  )

static

static basic::Tracer protocols::qsar::scoring_grid::GridManagerTracer ( "protocols.qsar.scoring_grid.GridManager"  )

static

Referenced by protocols::qsar::scoring_grid::GridManager::make_new_grid(), and protocols::qsar::scoring_grid::GridManager::update_grids().

static basic::Tracer protocols::qsar::scoring_grid::RepGridTracer ( "protocols.ligand_docking.scoring_grid.RepGrid"  )

static

static basic::Tracer protocols::qsar::scoring_grid::TR ( "protocols.qsar.scoring_grid.ScoringGridLoader"  )

static