| AA1name | core::scoring::constraints::ResidueTypeLinkingConstraint | private |
| AA2name | core::scoring::constraints::ResidueTypeLinkingConstraint | private |
| atom(Size const ) const | core::scoring::constraints::ResidueTypeLinkingConstraint | inlinevirtual |
| AtomID typedef | core::scoring::constraints::Constraint | |
| bonus_ | core::scoring::constraints::ResidueTypeLinkingConstraint | private |
| choose_effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &sp, numeric::random::RandomGenerator &) | core::scoring::constraints::Constraint | inlinevirtual |
| clone() const | core::scoring::constraints::ResidueTypeLinkingConstraint | virtual |
| core::scoring::constraints::Constraint::clone(FuncOP) const | core::scoring::constraints::Constraint | inlinevirtual |
| Constraint(ScoreType const &t) | core::scoring::constraints::Constraint | inline |
| dist(core::pose::Pose const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| dist(XYZ_Func const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| fill_f1_f2(AtomID const &atom, XYZ_Func const &xyz, Vector &F1, Vector &F2, EnergyMap const &weights) const | core::scoring::constraints::ResidueTypeLinkingConstraint | virtual |
| get_func() const | core::scoring::constraints::Constraint | inlinevirtual |
| natoms() const | core::scoring::constraints::ResidueTypeLinkingConstraint | inlinevirtual |
| operator!=(Constraint const &other) const | core::scoring::constraints::Constraint | inline |
| operator==(Constraint const &other) const | core::scoring::constraints::ResidueTypeLinkingConstraint | virtual |
| read_constraint(std::istream &, core::pose::Pose const &) | core::scoring::constraints::Constraint | inlinevirtual |
| read_data(std::istream &) | core::scoring::constraints::Constraint | inlinevirtual |
| read_def(std::istream &, pose::Pose const &, FuncFactory const &) | core::scoring::constraints::Constraint | inlinevirtual |
| Real typedef | core::scoring::constraints::ResidueTypeLinkingConstraint | |
| remap_resid(core::id::SequenceMapping const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| remapped_clone(pose::Pose const &, pose::Pose const &, id::SequenceMappingCOP map=NULL) const | core::scoring::constraints::Constraint | inlinevirtual |
| residues() const | core::scoring::constraints::ResidueTypeLinkingConstraint | virtual |
| ResidueTypeLinkingConstraint() | core::scoring::constraints::ResidueTypeLinkingConstraint | |
| ResidueTypeLinkingConstraint(pose::Pose const &pose, Size seqpos1, Size seqpos2, Real bonus) | core::scoring::constraints::ResidueTypeLinkingConstraint | |
| ResidueTypeLinkingConstraint(pose::Pose const &pose, Size seqpos1, Size seqpos2, std::string AA1name, std::string AA2name, Real bonus) | core::scoring::constraints::ResidueTypeLinkingConstraint | |
| rsd1_type_name3_ | core::scoring::constraints::ResidueTypeLinkingConstraint | private |
| rsd2_type_name3_ | core::scoring::constraints::ResidueTypeLinkingConstraint | private |
| score(XYZ_Func const &xyz_func, EnergyMap const &weights, EnergyMap &emap) const | core::scoring::constraints::ResidueTypeLinkingConstraint | virtual |
| core::scoring::constraints::Constraint::score(conformation::Conformation const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| score_type() const | core::scoring::constraints::Constraint | inline |
| seqpos1_ | core::scoring::constraints::ResidueTypeLinkingConstraint | private |
| seqpos2_ | core::scoring::constraints::ResidueTypeLinkingConstraint | private |
| setup_for_derivatives(XYZ_Func const &, ScoreFunction const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| setup_for_scoring(XYZ_Func const &, ScoreFunction const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| show(std::ostream &out) const | core::scoring::constraints::ResidueTypeLinkingConstraint | virtual |
| show_def(std::ostream &, pose::Pose const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| show_violations(std::ostream &out, pose::Pose const &, Size, Real threshold=1) const | core::scoring::constraints::Constraint | virtual |
| steal_def(pose::Pose const &) | core::scoring::constraints::Constraint | inlinevirtual |
| to_string() const | core::scoring::constraints::Constraint | inline |
| type() const | core::scoring::constraints::Constraint | inlinevirtual |
| ~Constraint() | core::scoring::constraints::Constraint | virtual |
| ~ResidueTypeLinkingConstraint() | core::scoring::constraints::ResidueTypeLinkingConstraint | virtual |
1.8.4