#include <protocols/rna/FullAtomRNA_Fragments.hh>
#include <protocols/toolbox/AllowInsert.hh>
#include <protocols/rna/RNA_SecStructInfo.hh>
#include <protocols/rna/RNA_ProtocolUtil.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/util.hh>
#include <core/scoring/rna/RNA_Util.hh>
#include <core/id/TorsionID.hh>
#include <core/id/AtomID.hh>
#include <core/id/NamedAtomID.hh>
#include <core/pose/Pose.hh>
#include <ObjexxFCL/FArray1D.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <ObjexxFCL/StaticIndexRange.hh>
#include <ObjexxFCL/format.hh>
#include <utility/io/izstream.hh>
#include <utility/exit.hh>
#include <numeric/xyzVector.hh>
#include <core/types.hh>
#include <fstream>
#include <iostream>
#include <utility/vector1.hh>
#include <utility/options/BooleanVectorOption.hh>
#include <numeric/random/random.fwd.hh>
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