protocols::pack_daemon::QuickRepacker Class Reference

#include <PackDaemon.hh>

Inheritance diagram for protocols::pack_daemon::QuickRepacker:

Collaboration diagram for protocols::pack_daemon::QuickRepacker:

Public Types
typedef utility::pointer::ReferenceCount	parent
typedef PackDaemon::RotamerAssignmentAndEnergy	RotamerAssignmentAndEnergy
typedef core::pose::PoseOP	PoseOP
typedef core::pack::task::PackerTaskOP	PackerTaskOP
typedef core::pack::interaction_graph::FixedBBInteractionGraphOP	FixedBBInteractionGraphOP
typedef core::pack::rotamer_set::RotamerSetsOP	RotamerSetsOP

Public Member Functions
	QuickRepacker (PoseOP pose, PackerTaskOP task, FixedBBInteractionGraphOP ig, RotamerSetsOP rot_sets)
virtual	~QuickRepacker ()
virtual RotamerAssignmentAndEnergy	repack (utility::vector0< int > const &rot_to_pack)=0

Protected Member Functions
PoseOP	pose ()
	Read access to derived classes. More...
PackerTaskOP	task ()
FixedBBInteractionGraphOP	ig ()
RotamerSetsOP	rot_sets ()
void	task (PackerTaskOP)

Private Attributes
PoseOP	pose_
PackerTaskOP	task_
FixedBBInteractionGraphOP	ig_
RotamerSetsOP	rot_sets_

Detailed Description

Definition at line 410 of file PackDaemon.hh.

Member Typedef Documentation

typedef core::pack::interaction_graph::FixedBBInteractionGraphOP protocols::pack_daemon::QuickRepacker::FixedBBInteractionGraphOP

Definition at line 417 of file PackDaemon.hh.

typedef core::pack::task::PackerTaskOP protocols::pack_daemon::QuickRepacker::PackerTaskOP

Definition at line 416 of file PackDaemon.hh.

typedef utility::pointer::ReferenceCount protocols::pack_daemon::QuickRepacker::parent

Definition at line 413 of file PackDaemon.hh.

typedef core::pose::PoseOP protocols::pack_daemon::QuickRepacker::PoseOP

Definition at line 415 of file PackDaemon.hh.

typedef PackDaemon::RotamerAssignmentAndEnergy protocols::pack_daemon::QuickRepacker::RotamerAssignmentAndEnergy

Definition at line 414 of file PackDaemon.hh.

typedef core::pack::rotamer_set::RotamerSetsOP protocols::pack_daemon::QuickRepacker::RotamerSetsOP

Definition at line 418 of file PackDaemon.hh.

Constructor & Destructor Documentation

protocols::pack_daemon::QuickRepacker::QuickRepacker	(	PoseOP	pose,
		PackerTaskOP	task,
		FixedBBInteractionGraphOP	ig,
		RotamerSetsOP	rot_sets
	)

Definition at line 1150 of file PackDaemon.cc.

protocols::pack_daemon::QuickRepacker::~QuickRepacker ( )

virtual

Definition at line 1162 of file PackDaemon.cc.

Member Function Documentation

QuickRepacker::FixedBBInteractionGraphOP protocols::pack_daemon::QuickRepacker::ig ( )

protected

Definition at line 1166 of file PackDaemon.cc.

References ig_.

Referenced by protocols::pack_daemon::BasicSimAnnealerRepacker::BasicSimAnnealerRepacker(), protocols::pack_daemon::DenseIGRepacker::create_dense_pdig_from_rot_to_pack(), protocols::pack_daemon::DoubleDenseIGRepacker::create_dense_pdig_from_rot_to_pack(), protocols::pack_daemon::FASTER_IG_Repacker::create_faster_ig_from_rot_to_pack(), protocols::pack_daemon::DenseIGRepacker::DenseIGRepacker(), protocols::pack_daemon::DoubleDenseIGRepacker::DoubleDenseIGRepacker(), protocols::pack_daemon::FASTER_IG_Repacker::FASTER_IG_Repacker(), and protocols::pack_daemon::BasicSimAnnealerRepacker::repack().

QuickRepacker::PoseOP protocols::pack_daemon::QuickRepacker::pose ( )

protected

Read access to derived classes.

Definition at line 1164 of file PackDaemon.cc.

References pose_.

Referenced by protocols::pack_daemon::BasicSimAnnealerRepacker::repack(), protocols::pack_daemon::DenseIGRepacker::repack(), protocols::pack_daemon::DoubleDenseIGRepacker::repack(), and protocols::pack_daemon::FASTER_IG_Repacker::repack().

virtual RotamerAssignmentAndEnergy protocols::pack_daemon::QuickRepacker::repack ( utility::vector0< int > const &  rot_to_pack)

pure virtual

Implemented in protocols::pack_daemon::FASTER_IG_Repacker, protocols::pack_daemon::DoubleDenseIGRepacker, protocols::pack_daemon::DenseIGRepacker, and protocols::pack_daemon::BasicSimAnnealerRepacker.

QuickRepacker::RotamerSetsOP protocols::pack_daemon::QuickRepacker::rot_sets ( )

protected

Definition at line 1167 of file PackDaemon.cc.

References rot_sets_.

Referenced by protocols::pack_daemon::DenseIGRepacker::create_dense_pdig_from_rot_to_pack(), protocols::pack_daemon::DoubleDenseIGRepacker::create_dense_pdig_from_rot_to_pack(), protocols::pack_daemon::FASTER_IG_Repacker::create_faster_ig_from_rot_to_pack(), protocols::pack_daemon::RotamerSubsetRepacker::create_rotamer_subsets_from_rot_to_pack(), protocols::pack_daemon::BasicSimAnnealerRepacker::repack(), protocols::pack_daemon::DenseIGRepacker::repack(), protocols::pack_daemon::DoubleDenseIGRepacker::repack(), and protocols::pack_daemon::FASTER_IG_Repacker::repack().

QuickRepacker::PackerTaskOP protocols::pack_daemon::QuickRepacker::task ( )

protected

Definition at line 1165 of file PackDaemon.cc.

References task_.

Referenced by protocols::pack_daemon::BasicSimAnnealerRepacker::repack(), protocols::pack_daemon::DenseIGRepacker::repack(), protocols::pack_daemon::DoubleDenseIGRepacker::repack(), and protocols::pack_daemon::DenseIGRepacker::set_MCA().

void protocols::pack_daemon::QuickRepacker::task ( PackerTaskOP  setting)

protected

Definition at line 1168 of file PackDaemon.cc.

References task_.

Member Data Documentation

FixedBBInteractionGraphOP protocols::pack_daemon::QuickRepacker::ig_

private

Definition at line 445 of file PackDaemon.hh.

Referenced by ig().

PoseOP protocols::pack_daemon::QuickRepacker::pose_

private

Definition at line 443 of file PackDaemon.hh.

Referenced by pose().

RotamerSetsOP protocols::pack_daemon::QuickRepacker::rot_sets_

private

Definition at line 446 of file PackDaemon.hh.

Referenced by rot_sets().

PackerTaskOP protocols::pack_daemon::QuickRepacker::task_

private

Definition at line 444 of file PackDaemon.hh.

Referenced by task().

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The documentation for this class was generated from the following files:

• src/protocols/pack_daemon/PackDaemon.hh
• src/protocols/pack_daemon/PackDaemon.cc