| add_required_connection_for_residue(core::Size residue) | protocols::simple_filters::PackerNeighborGraphFilter | |
| add_required_connections_between_regions(std::set< core::Size > const ®ion1, std::set< core::Size > const ®ion2, core::Size required_connections) | protocols::simple_filters::PackerNeighborGraphFilter | |
| apply(core::pose::Pose const &pose) const | protocols::simple_filters::PackerNeighborGraphFilter | virtual |
| protocols::filters::Filter::apply(core::io::serialization::PipeMap &pmap) | protocols::filters::Filter | virtual |
| clear() | protocols::filters::Filter | inlinevirtual |
| clone() const | protocols::simple_filters::PackerNeighborGraphFilter | inlinevirtual |
| Filter() | protocols::filters::Filter | |
| Filter(std::string const &) | protocols::filters::Filter | |
| Filter(Filter const &) | protocols::filters::Filter | |
| fresh_instance() const | protocols::simple_filters::PackerNeighborGraphFilter | inlinevirtual |
| get_type() const | protocols::filters::Filter | inlinevirtual |
| get_user_defined_name() const | protocols::filters::Filter | inline |
| name() const | protocols::simple_filters::PackerNeighborGraphFilter | inlinevirtual |
| PackerNeighborGraphFilter(core::pack::task::PackerTaskCOP task, core::scoring::ScoreFunctionCOP sfxn) | protocols::simple_filters::PackerNeighborGraphFilter | inline |
| PackerNeighborGraphFilter() | protocols::simple_filters::PackerNeighborGraphFilter | |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks) | protocols::filters::Filter | virtual |
| parse_my_tag(utility::tag::TagPtr const, moves::DataMap &, Filters_map const &, moves::Movers_map const &, core::pose::Pose const &) | protocols::filters::Filter | virtual |
| report(std::ostream &, core::pose::Pose const &) const | protocols::filters::Filter | inlinevirtual |
| report_sm(core::pose::Pose const &) const | protocols::filters::Filter | inlinevirtual |
| required_connections_between_regions_ | protocols::simple_filters::PackerNeighborGraphFilter | private |
| required_connections_per_res_ | protocols::simple_filters::PackerNeighborGraphFilter | private |
| score(core::io::serialization::PipeMap &pmap) | protocols::filters::Filter | virtual |
| score(core::pose::Pose &pose) | protocols::filters::Filter | virtual |
| scorename_ | protocols::filters::Filter | protected |
| set_required_connections_for_residue(core::Size residue, core::Size required_connections) | protocols::simple_filters::PackerNeighborGraphFilter | |
| set_task(core::pack::task::PackerTaskCOP task) | protocols::simple_filters::PackerNeighborGraphFilter | inline |
| set_user_defined_name(std::string const &name) | protocols::filters::Filter | inline |
| sfxn_ | protocols::simple_filters::PackerNeighborGraphFilter | private |
| task_ | protocols::simple_filters::PackerNeighborGraphFilter | private |
| task_invalidated_ | protocols::simple_filters::PackerNeighborGraphFilter | private |
| ~Filter() | protocols::filters::Filter | virtual |
| ~PackerNeighborGraphFilter() | protocols::simple_filters::PackerNeighborGraphFilter | |
1.8.4