protocols::rotamer_recovery::RRProtocolRotamerTrials Class Reference

#include <RRProtocolRotamerTrials.hh>

Inheritance diagram for protocols::rotamer_recovery::RRProtocolRotamerTrials:

Collaboration diagram for protocols::rotamer_recovery::RRProtocolRotamerTrials:

Public Member Functions
	RRProtocolRotamerTrials ()
	~RRProtocolRotamerTrials ()
	RRProtocolRotamerTrials (RRProtocolRotamerTrials const &)
virtual std::string	get_name () const
virtual std::string	get_parameters () const
void	run (RRComparerOP comparer, RRReporterOP reporter, core::pose::Pose const &pose, core::scoring::ScoreFunction const &score_function, core::pack::task::PackerTask const &packer_task)
Public Member Functions inherited from protocols::rotamer_recovery::RRProtocol
virtual	~RRProtocol ()
	Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...

Additional Inherited Members
Protected Member Functions inherited from protocols::rotamer_recovery::RRProtocol
bool	measure_rotamer_recovery (RRComparerOP comparer, RRReporterOP reporter, core::pose::Pose const &pose1, core::pose::Pose const &pose2, core::conformation::Residue const &res1, core::conformation::Residue const &res2)

Detailed Description

Definition at line 34 of file RRProtocolRotamerTrials.hh.

Constructor & Destructor Documentation

protocols::rotamer_recovery::RRProtocolRotamerTrials::RRProtocolRotamerTrials

(

)

Definition at line 58 of file RRProtocolRotamerTrials.cc.

protocols::rotamer_recovery::RRProtocolRotamerTrials::~RRProtocolRotamerTrials

(

)

Definition at line 62 of file RRProtocolRotamerTrials.cc.

protocols::rotamer_recovery::RRProtocolRotamerTrials::RRProtocolRotamerTrials

(

RRProtocolRotamerTrials const &

)

Definition at line 60 of file RRProtocolRotamerTrials.cc.

Member Function Documentation

string protocols::rotamer_recovery::RRProtocolRotamerTrials::get_name ( ) const

virtual

Implements protocols::rotamer_recovery::RRProtocol.

Definition at line 65 of file RRProtocolRotamerTrials.cc.

string protocols::rotamer_recovery::RRProtocolRotamerTrials::get_parameters ( ) const

virtual

Implements protocols::rotamer_recovery::RRProtocol.

Definition at line 70 of file RRProtocolRotamerTrials.cc.

void protocols::rotamer_recovery::RRProtocolRotamerTrials::run ( RRComparerOP  comparer, RRReporterOP  reporter, core::pose::Pose const &  pose, core::scoring::ScoreFunction const &  score_function, core::pack::task::PackerTask const &  packer_task  )

virtual

For each residue, minimize it, and measure the rotamer compared to where it started

Implements protocols::rotamer_recovery::RRProtocol.

Definition at line 78 of file RRProtocolRotamerTrials.cc.

References core::chemical::aa_unk, core::pack::task::PackerTask::clone(), core::pack::create_packer_graph(), core::pack::rotamer_set::RotamerSetFactory::create_rotamer_set(), core::pack::task::PackerTask::include_current(), protocols::rotamer_recovery::RRProtocol::measure_rotamer_recovery(), core::pack::task::PackerTask::pack_residue(), core::pose::Pose::residue(), core::pack::rotamer_trials(), and core::pose::Pose::total_residue().

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The documentation for this class was generated from the following files:

• src/protocols/rotamer_recovery/RRProtocolRotamerTrials.hh
• src/protocols/rotamer_recovery/RRProtocolRotamerTrials.cc