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protocols::antibody2::SnugDockProtocol Member List

This is the complete list of members for protocols::antibody2::SnugDockProtocol, including all inherited members.

antibody_info_protocols::antibody2::SnugDockProtocolprivate
apply(Pose &)protocols::antibody2::SnugDockProtocolvirtual
protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap)protocols::moves::Movervirtual
clear_info()protocols::moves::Moverinlinevirtual
clone() const protocols::antibody2::SnugDockProtocolvirtual
create()protocols::moves::Movervirtual
docking() const protocols::antibody2::SnugDockProtocolprivate
docking_protocols::antibody2::SnugDockProtocolmutableprivate
Filters_map typedefprotocols::moves::Mover
fresh_instance() const protocols::antibody2::SnugDockProtocolvirtual
get_additional_output()protocols::moves::Movervirtual
get_current_job() const protocols::moves::Mover
get_current_tag() const protocols::moves::Moverinline
get_input_pose() const protocols::moves::Mover
get_last_move_status() const protocols::moves::Mover
get_name() const protocols::antibody2::SnugDockProtocolvirtual
get_native_pose() const protocols::moves::Mover
get_type() const protocols::moves::Moverinline
info()protocols::moves::Moverinlinevirtual
info() const protocols::moves::Moverinlinevirtual
init()protocols::antibody2::SnugDockProtocolprivate
init_for_equal_operator_and_copy_constructor(SnugDockProtocol &lhs, SnugDockProtocol const &rhs)protocols::antibody2::SnugDockProtocolprivate
init_options()protocols::antibody2::SnugDockProtocolprivate
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
loop_refinement_method_protocols::antibody2::SnugDockProtocolprivate
low_res_refine_cdr_h2_protocols::antibody2::SnugDockProtocolprivate
low_res_refine_cdr_h3_protocols::antibody2::SnugDockProtocolprivate
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
Mover(Mover const &other)protocols::moves::Mover
name()protocols::moves::Moverinlinestatic
operator<<(std::ostream &out, SnugDockProtocol const &snugdockprotocol)protocols::antibody2::SnugDockProtocolfriend
operator=(SnugDockProtocol const &rhs)protocols::antibody2::SnugDockProtocol
protocols::moves::Mover::operator=(Mover const &other)protocols::moves::Mover
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache)protocols::moves::Movervirtual
parse_my_tag(TagPtr const tag, DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose)protocols::moves::Movervirtual
parse_state(SerializableState const &state)protocols::moves::Movervirtual
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
register_options()protocols::antibody2::SnugDockProtocolstatic
reinitialize_for_each_job() const protocols::moves::Movervirtual
reinitialize_for_new_input() const protocols::antibody2::SnugDockProtocolvirtual
reset_status()protocols::moves::Mover
save_state(SerializableState &state)protocols::moves::Movervirtual
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinline
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
setup_loop_refinement_movers()protocols::antibody2::SnugDockProtocolprivate
setup_objects(Pose const &pose)protocols::antibody2::SnugDockProtocolprivate
show(std::ostream &out=std::cout)protocols::antibody2::SnugDockProtocol
SnugDockProtocol()protocols::antibody2::SnugDockProtocol
SnugDockProtocol(SnugDockProtocol const &rhs)protocols::antibody2::SnugDockProtocol
Strings typedefprotocols::moves::Mover
TagPtr typedefprotocols::moves::Mover
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
type() const protocols::moves::Moverinline
type(const std::string &type_in)protocols::moves::Moverinline
~Mover()protocols::moves::Movervirtual
~SnugDockProtocol()protocols::antibody2::SnugDockProtocolvirtual
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