core::pack::scmin Namespace Reference

Classes
class	ResidueAtomTreeCollectionMomento
	Class to save the state for a ResidueAtomTreeCollection. More...
class	ResidueAtomTreeCollection
	The conformation::Residues and kinematics::AtomTrees for a single collection of rotamers (e.g. a RotamerSet). Each chemical::ResidueType gets its own residue/atomtree pair. A particular AtomTree/Residue pair can be set as "active" and manipulated by setter and getters for either the coordinates of the Residues or the chi dihedrals of the AtomTree. More...
class	AtomTreeCollection
	A collection of ResidueAtomTreeCollection objects for an entire design task. More...
class	AtomTreeSCMinMinimizerMap
class	CartSCMinMinimizerMap
class	CartSCMinMultifunc
class	SCMinMinimizerMap
class	SCMinMultifunc
class	SidechainStateAssignment

Typedefs
typedef utility::pointer::owning_ptr < ResidueAtomTreeCollectionMomento >	ResidueAtomTreeCollectionMomentoOP
typedef utility::pointer::owning_ptr < ResidueAtomTreeCollectionMomento const >	ResidueAtomTreeCollectionMomentoCOP
typedef utility::pointer::owning_ptr < ResidueAtomTreeCollection >	ResidueAtomTreeCollectionOP
typedef utility::pointer::owning_ptr < ResidueAtomTreeCollection const >	ResidueAtomTreeCollectionCOP
typedef utility::pointer::owning_ptr < AtomTreeCollection >	AtomTreeCollectionOP
typedef utility::pointer::owning_ptr < AtomTreeCollection const >	AtomTreeCollectionCOP
typedef utility::pointer::owning_ptr < AtomTreeSCMinMinimizerMap >	AtomTreeSCMinMinimizerMapOP
typedef utility::pointer::owning_ptr < AtomTreeSCMinMinimizerMap const >	AtomTreeSCMinMinimizerMapCOP
typedef utility::pointer::owning_ptr < CartSCMinMinimizerMap >	CartSCMinMinimizerMapOP
typedef utility::pointer::owning_ptr < CartSCMinMinimizerMap const >	CartSCMinMinimizerMapCOP
typedef utility::pointer::owning_ptr < CartSCMinMultifunc >	CartSCMinMultifuncOP
typedef utility::pointer::owning_ptr < CartSCMinMultifunc >	CartSCMinMultifuncCOP
typedef utility::pointer::owning_ptr < SCMinMinimizerMap >	SCMinMinimizerMapOP
typedef utility::pointer::owning_ptr < SCMinMinimizerMap const >	SCMinMinimizerMapCOP
typedef utility::pointer::owning_ptr < SCMinMultifunc >	SCMinMultifuncOP
typedef utility::pointer::owning_ptr < SCMinMultifunc >	SCMinMultifuncCOP

Functions
optimization::DOF_NodeOP	dummy_nodeop (new optimization::DOF_Node(id::DOF_ID(), NULL))

Variables
optimization::DOF_NodeOP	dummy_nodeop

Typedef Documentation

typedef utility::pointer::owning_ptr< AtomTreeCollection const > core::pack::scmin::AtomTreeCollectionCOP

Definition at line 36 of file AtomTreeCollection.fwd.hh.

typedef utility::pointer::owning_ptr< AtomTreeCollection > core::pack::scmin::AtomTreeCollectionOP

Definition at line 33 of file AtomTreeCollection.fwd.hh.

typedef utility::pointer::owning_ptr< AtomTreeSCMinMinimizerMap const > core::pack::scmin::AtomTreeSCMinMinimizerMapCOP

Definition at line 28 of file AtomTreeSCMinMinimizerMap.fwd.hh.

typedef utility::pointer::owning_ptr< AtomTreeSCMinMinimizerMap > core::pack::scmin::AtomTreeSCMinMinimizerMapOP

Definition at line 25 of file AtomTreeSCMinMinimizerMap.fwd.hh.

typedef utility::pointer::owning_ptr< CartSCMinMinimizerMap const > core::pack::scmin::CartSCMinMinimizerMapCOP

Definition at line 28 of file CartSCMinMinimizerMap.fwd.hh.

typedef utility::pointer::owning_ptr< CartSCMinMinimizerMap > core::pack::scmin::CartSCMinMinimizerMapOP

Definition at line 25 of file CartSCMinMinimizerMap.fwd.hh.

typedef utility::pointer::owning_ptr< CartSCMinMultifunc > core::pack::scmin::CartSCMinMultifuncCOP

Definition at line 27 of file CartSCMinMultifunc.fwd.hh.

typedef utility::pointer::owning_ptr< CartSCMinMultifunc > core::pack::scmin::CartSCMinMultifuncOP

Definition at line 24 of file CartSCMinMultifunc.fwd.hh.

typedef utility::pointer::owning_ptr< ResidueAtomTreeCollection const > core::pack::scmin::ResidueAtomTreeCollectionCOP

Definition at line 31 of file AtomTreeCollection.fwd.hh.

typedef utility::pointer::owning_ptr< ResidueAtomTreeCollectionMomento const > core::pack::scmin::ResidueAtomTreeCollectionMomentoCOP

Definition at line 26 of file AtomTreeCollection.fwd.hh.

typedef utility::pointer::owning_ptr< ResidueAtomTreeCollectionMomento > core::pack::scmin::ResidueAtomTreeCollectionMomentoOP

Definition at line 24 of file AtomTreeCollection.fwd.hh.

typedef utility::pointer::owning_ptr< ResidueAtomTreeCollection > core::pack::scmin::ResidueAtomTreeCollectionOP

Definition at line 28 of file AtomTreeCollection.fwd.hh.

typedef utility::pointer::owning_ptr< SCMinMinimizerMap const > core::pack::scmin::SCMinMinimizerMapCOP

Definition at line 28 of file SCMinMinimizerMap.fwd.hh.

typedef utility::pointer::owning_ptr< SCMinMinimizerMap > core::pack::scmin::SCMinMinimizerMapOP

Definition at line 25 of file SCMinMinimizerMap.fwd.hh.

typedef utility::pointer::owning_ptr< SCMinMultifunc > core::pack::scmin::SCMinMultifuncCOP

Definition at line 27 of file SCMinMultifunc.fwd.hh.

typedef utility::pointer::owning_ptr< SCMinMultifunc > core::pack::scmin::SCMinMultifuncOP

Definition at line 24 of file SCMinMultifunc.fwd.hh.

Function Documentation

optimization::DOF_NodeOP core::pack::scmin::dummy_nodeop

(

new optimization::

DOF_Nodeid::DOF_ID(), NULL)

Variable Documentation

optimization::DOF_NodeOP core::pack::scmin::dummy_nodeop

Referenced by core::pack::scmin::CartSCMinMinimizerMap::dof_node(), and core::pack::scmin::CartSCMinMinimizerMap::dof_node_for_chi().