protocols::simple_filters::SAXSScoreFilter Class Reference

#include <SAXSScoreFilter.hh>

Inheritance diagram for protocols::simple_filters::SAXSScoreFilter:

Collaboration diagram for protocols::simple_filters::SAXSScoreFilter:

Public Member Functions
	SAXSScoreFilter ()
	c-tor and d-tor More...
virtual	~SAXSScoreFilter ()
filters::FilterOP	clone () const
filters::FilterOP	fresh_instance () const
virtual bool	apply (core::pose::Pose const &pose) const
	Returns true if the given pose passes the filter, false otherwise. More...
virtual std::string	name () const
core::Real	cutoff () const
void	cutoff (core::Real cutoff_value)
core::Real	recent_score ()
Public Member Functions inherited from protocols::filters::Filter
	Filter ()
	Filter (std::string const &)
	Filter (Filter const &)
virtual	~Filter ()
virtual void	report (std::ostream &, core::pose::Pose const &) const
virtual core::Real	report_sm (core::pose::Pose const &) const
	used to report filter internals through a score or silent file More...
virtual std::string	get_type () const
std::string	get_user_defined_name () const
void	set_user_defined_name (std::string const &name)
virtual void	clear ()
	used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...
virtual void	parse_my_tag (utility::tag::TagPtr const, moves::DataMap &, Filters_map const &, moves::Movers_map const &, core::pose::Pose const &)
virtual void	apply (core::io::serialization::PipeMap &pmap)
virtual void	score (core::io::serialization::PipeMap &pmap)
virtual core::Real	score (core::pose::Pose &pose)
virtual void	parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)

Private Attributes
core::scoring::saxs::SAXSEnergyFA	score
core::Real	score_value_
core::Real	cutoff_

Additional Inherited Members
Protected Attributes inherited from protocols::filters::Filter
std::string	scorename_

Detailed Description

Definition at line 30 of file SAXSScoreFilter.hh.

Constructor & Destructor Documentation

protocols::simple_filters::SAXSScoreFilter::SAXSScoreFilter

(

)

c-tor and d-tor

Definition at line 65 of file SAXSScoreFilter.cc.

References cutoff_, and score_value_.

Referenced by clone(), and fresh_instance().

virtual protocols::simple_filters::SAXSScoreFilter::~SAXSScoreFilter ( )

inlinevirtual

Definition at line 35 of file SAXSScoreFilter.hh.

Member Function Documentation

bool protocols::simple_filters::SAXSScoreFilter::apply ( core::pose::Pose const &  pose) const

virtual

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

Definition at line 75 of file SAXSScoreFilter.cc.

References core::pack::task::TaskFactory::create_packer_task(), cutoff_, core::chemical::FA_STANDARD, core::scoring::getScoreFunction(), core::pose::Pose::is_fullatom(), core::pack::pack_rotamers(), core::optimization::AtomTreeMinimizer::run(), score, score_value_, core::kinematics::MoveMap::set_bb(), core::kinematics::MoveMap::set_chi(), core::util::switch_to_residue_type_set(), core::scoring::saxs::SAXSEnergy::total_energy(), and protocols::simple_filters::tr().

filters::FilterOP protocols::simple_filters::SAXSScoreFilter::clone ( ) const

inlinevirtual

Implements protocols::filters::Filter.

Definition at line 37 of file SAXSScoreFilter.hh.

References SAXSScoreFilter().

core::Real protocols::simple_filters::SAXSScoreFilter::cutoff ( ) const

inline

Definition at line 53 of file SAXSScoreFilter.hh.

References cutoff_.

void protocols::simple_filters::SAXSScoreFilter::cutoff ( core::Real  cutoff_value)

inline

Definition at line 57 of file SAXSScoreFilter.hh.

References cutoff_.

filters::FilterOP protocols::simple_filters::SAXSScoreFilter::fresh_instance ( ) const

inlinevirtual

Implements protocols::filters::Filter.

Definition at line 40 of file SAXSScoreFilter.hh.

References SAXSScoreFilter().

virtual std::string protocols::simple_filters::SAXSScoreFilter::name ( ) const

inlinevirtual

Reimplemented from protocols::filters::Filter.

Definition at line 49 of file SAXSScoreFilter.hh.

core::Real protocols::simple_filters::SAXSScoreFilter::recent_score ( )

inline

Definition at line 59 of file SAXSScoreFilter.hh.

References score_value_.

Member Data Documentation

core::Real protocols::simple_filters::SAXSScoreFilter::cutoff_

private

Definition at line 63 of file SAXSScoreFilter.hh.

Referenced by apply(), cutoff(), and SAXSScoreFilter().

core::scoring::saxs::SAXSEnergyFA protocols::simple_filters::SAXSScoreFilter::score

private

Definition at line 61 of file SAXSScoreFilter.hh.

Referenced by apply().

core::Real protocols::simple_filters::SAXSScoreFilter::score_value_

mutableprivate

Definition at line 62 of file SAXSScoreFilter.hh.

Referenced by apply(), recent_score(), and SAXSScoreFilter().

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The documentation for this class was generated from the following files:

• src/protocols/simple_filters/SAXSScoreFilter.hh
• src/protocols/simple_filters/SAXSScoreFilter.cc