protocols::simple_moves::chiral Namespace Reference

Classes
class	ChiralMover

Typedefs
typedef utility::pointer::owning_ptr < ChiralMover >	ChiralMoverOP
typedef utility::pointer::owning_ptr < ChiralMover const >	ChiralMoverCOP

Enumerations
enum	Chirality { L_CHIRALITY =1, D_CHIRALITY, FLIP_CHIRALITY }

Functions
std::map< std::string, std::string >	L2DChiralMap (L2DChiralData, L2DChiralData+sizeof L2DChiralData/sizeof L2DChiralData[0])
std::map< std::string, std::string >	D2LChiralMap (D2LChiralData, D2LChiralData+sizeof D2LChiralData/sizeof D2LChiralData[0])
bool	is_d_chiral (core::chemical::ResidueType restype)
bool	is_l_chiral (core::chemical::ResidueType restype)
ResidueType const &	get_chiral_residue_type (ResidueType const &rt, Chirality chirality)

Variables
std::pair< std::string, std::string >	L2DChiralData []
std::pair< std::string, std::string >	D2LChiralData []

Typedef Documentation

typedef utility::pointer::owning_ptr< ChiralMover const > protocols::simple_moves::chiral::ChiralMoverCOP

Definition at line 26 of file ChiralMover.fwd.hh.

typedef utility::pointer::owning_ptr< ChiralMover > protocols::simple_moves::chiral::ChiralMoverOP

Definition at line 24 of file ChiralMover.fwd.hh.

Enumeration Type Documentation

enum protocols::simple_moves::chiral::Chirality

Enumerator
L_CHIRALITY
D_CHIRALITY
FLIP_CHIRALITY

Definition at line 33 of file ChiralMover.hh.

Function Documentation

std::map<std::string, std::string> protocols::simple_moves::chiral::D2LChiralMap	(	D2LChiralData	,
		D2LChiralData+sizeof D2LChiralData/sizeof	D2LChiralData[0]
	)

Referenced by get_chiral_residue_type(), and is_d_chiral().

ResidueType const& protocols::simple_moves::chiral::get_chiral_residue_type	(	ResidueType const &	rt,
		Chirality	chirality
	)

Definition at line 372 of file ChiralMover.cc.

References core::chemical::ResidueType::aa(), protocols::vip::base_name(), D2LChiralMap(), D_CHIRALITY, core::chemical::FA_STANDARD, core::chemical::ChemicalManager::get_instance(), L2DChiralMap(), L_CHIRALITY, core::chemical::ResidueType::name(), core::chemical::residue_type_all_patches_name(), core::chemical::residue_type_base_name(), and core::conformation::TR().

Referenced by protocols::simple_moves::chiral::ChiralMover::apply().

bool protocols::simple_moves::chiral::is_d_chiral

(

core::chemical::ResidueType

restype)

Definition at line 356 of file ChiralMover.cc.

References protocols::vip::base_name(), D2LChiralMap(), core::chemical::residue_type_base_name(), and core::conformation::TR().

Referenced by protocols::simple_moves::oop::OopRandomPuckMover::apply().

bool protocols::simple_moves::chiral::is_l_chiral

(

core::chemical::ResidueType

restype)

Definition at line 363 of file ChiralMover.cc.

References protocols::vip::base_name(), L2DChiralMap(), core::chemical::residue_type_base_name(), and core::conformation::TR().

std::map<std::string, std::string> protocols::simple_moves::chiral::L2DChiralMap	(	L2DChiralData	,
		L2DChiralData+sizeof L2DChiralData/sizeof	L2DChiralData[0]
	)

Referenced by get_chiral_residue_type(), and is_l_chiral().

Variable Documentation

std::pair< std::string, std::string > protocols::simple_moves::chiral::D2LChiralData[]

Definition at line 206 of file ChiralMover.cc.

std::pair< std::string, std::string > protocols::simple_moves::chiral::L2DChiralData[]

Definition at line 57 of file ChiralMover.cc.