protocols::frag_picker::scores::MakeFragmentScoringMethod Class Reference

a fragment candidate More...

#include <FragmentScoringMethod.hh>

Inheritance diagram for protocols::frag_picker::scores::MakeFragmentScoringMethod:

Collaboration diagram for protocols::frag_picker::scores::MakeFragmentScoringMethod:

Public Member Functions
	MakeFragmentScoringMethod (std::string name)
virtual FragmentScoringMethodOP	make (Size, Real, bool, FragmentPickerOP, std::string)=0
std::string &	get_score_name ()

Private Attributes
std::string	name_

Detailed Description

a fragment candidate

Definition at line 98 of file FragmentScoringMethod.hh.

Constructor & Destructor Documentation

protocols::frag_picker::scores::MakeFragmentScoringMethod::MakeFragmentScoringMethod ( std::string  name)

inline

Definition at line 100 of file FragmentScoringMethod.hh.

Member Function Documentation

std::string& protocols::frag_picker::scores::MakeFragmentScoringMethod::get_score_name ( )

inline

Definition at line 107 of file FragmentScoringMethod.hh.

virtual FragmentScoringMethodOP protocols::frag_picker::scores::MakeFragmentScoringMethod::make ( Size  , Real  , bool  , FragmentPickerOP  , std::string    )

pure virtual

Implemented in protocols::frag_picker::scores::MakeProfileScoreDistWeight, protocols::frag_picker::scores::MakeHydrophobicityProfileSimilarity, protocols::frag_picker::scores::MakeHydrophobicitySimilarity, protocols::frag_picker::scores::MakeAtomPairConstraintsScore, protocols::frag_picker::scores::MakeTorsionBinSimilarity, protocols::frag_picker::scores::MakeLAMBEGO_Similarity, protocols::frag_picker::scores::MakeABEGO_SS_Score, protocols::frag_picker::scores::MakeSecondarySimilarity, protocols::frag_picker::scores::MakePartialSecondarySimilarity, protocols::frag_picker::scores::MakeTalosSSSimilarity, protocols::frag_picker::scores::MakeFragmentAllAtomCrmsd, protocols::frag_picker::scores::MakeFragmentCrmsdResDepth, protocols::frag_picker::scores::MakeRamaScore, protocols::frag_picker::scores::MakeCSScore, protocols::frag_picker::scores::MakeFragmentCrmsd, protocols::frag_picker::scores::MakeAmbigCSScore, protocols::frag_picker::scores::MakeFragmentDME, protocols::frag_picker::scores::MakeProfileScore, protocols::frag_picker::scores::MakePsi, protocols::frag_picker::scores::MakeSolventAccessibility, protocols::frag_picker::scores::MakePhi, protocols::frag_picker::scores::MakePhiPsiSquareWell, protocols::frag_picker::scores::MakeDihedralConstraintsScore, protocols::frag_picker::scores::MakeGunnCostScore, protocols::frag_picker::scores::MakeInterbondAngleScore, protocols::frag_picker::scores::MakePhiPsiRmsd, protocols::frag_picker::scores::MakePCS_FragDistance, protocols::frag_picker::scores::MakeProfileScoreL1, protocols::frag_picker::scores::MakeSecondaryIdentity, protocols::frag_picker::scores::MakeMidPhiOut, protocols::frag_picker::scores::MakeDisulfideDistance, protocols::frag_picker::scores::MakeProfileScoreBlosum62, protocols::frag_picker::scores::MakeProlinePhiScore, protocols::frag_picker::scores::MakeSequenceIdentity, protocols::frag_picker::scores::MakeProfileScoreSubMatrix, protocols::frag_picker::scores::MakeConstScore, protocols::frag_picker::scores::MakeProfileScoreStructL1, protocols::frag_picker::scores::MakeBFactor, protocols::frag_picker::scores::MakeDisulfideIdentity, protocols::frag_picker::scores::MakeJCoupling, protocols::frag_picker::scores::MakeMidPsiOut, and protocols::frag_picker::scores::MakeRDCScore.

Member Data Documentation

std::string protocols::frag_picker::scores::MakeFragmentScoringMethod::name_

private

Definition at line 112 of file FragmentScoringMethod.hh.

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The documentation for this class was generated from the following file:

• src/protocols/frag_picker/scores/FragmentScoringMethod.hh