core::pack::task::APOLAR Class Reference

APOLAR allows nonpolar residues and packing. More...

#include <ResfileReader.hh>

Inheritance diagram for core::pack::task::APOLAR:

Collaboration diagram for core::pack::task::APOLAR:

Public Member Functions
virtual ResfileCommandOP	clone () const
virtual void	initialize_from_tokens (utility::vector1< std::string > const &tokens, Size &which_token, Size resid)
	APOLAR allows nonpolar residues and packing apolarity is (ultimately) determined by the lack of a POLAR flag in the residue parameter file. More...
virtual void	residue_action (PackerTask &, Size resid) const
	Modify the packer task with the command that was read in. More...
Public Member Functions inherited from core::pack::task::ResfileCommand
virtual	~ResfileCommand ()
	Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...

Static Public Member Functions
static std::string	name ()

Detailed Description

APOLAR allows nonpolar residues and packing.

Definition at line 426 of file ResfileReader.hh.

Member Function Documentation

virtual ResfileCommandOP core::pack::task::APOLAR::clone ( ) const

inlinevirtual

Implements core::pack::task::ResfileCommand.

Definition at line 429 of file ResfileReader.hh.

void core::pack::task::APOLAR::initialize_from_tokens ( utility::vector1< std::string > const &  tokens, Size &  which_token, Size  resid  )

virtual

APOLAR allows nonpolar residues and packing apolarity is (ultimately) determined by the lack of a POLAR flag in the residue parameter file.

Implements core::pack::task::ResfileCommand.

Definition at line 913 of file ResfileReader.cc.

References core::pack::task::get_token().

static std::string core::pack::task::APOLAR::name ( )

inlinestatic

Definition at line 444 of file ResfileReader.hh.

Referenced by core::pack::task::create_command_map().

void core::pack::task::APOLAR::residue_action ( PackerTask &  , Size  resid  ) const

virtual

Modify the packer task with the command that was read in.

Implements core::pack::task::ResfileCommand.

Definition at line 924 of file ResfileReader.cc.

References core::pack::task::ResidueLevelTask::allowed_residue_types_begin(), core::pack::task::ResidueLevelTask::allowed_residue_types_end(), core::pack::task::PackerTask::nonconst_residue_task(), core::chemical::num_canonical_aas, core::pack::task::onError(), core::pack::task::PackerTask::residue_task(), and core::pack::task::ResidueLevelTask::restrict_absent_canonical_aas().

Referenced by core::pack::task::APOLA::residue_action().

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The documentation for this class was generated from the following files:

• src/core/pack/task/ResfileReader.hh
• src/core/pack/task/ResfileReader.cc