Rosetta 3.5
Main Page
Related Pages
Namespaces
Classes
Files
Examples
File List
File Members
All
Classes
Namespaces
Files
Functions
Variables
Typedefs
Enumerations
Enumerator
Friends
Macros
Pages
src
core
fragment
SRFD_Implementations.hh
Go to the documentation of this file.
1
// -*- mode:c++;tab-width:2;indent-tabs-mode:t;show-trailing-whitespace:t;rm-trailing-spaces:t -*-
2
// vi: set ts=2 noet:
3
// :noTabs=false:tabSize=4:indentSize=4:
4
//
5
// (c) Copyright Rosetta Commons Member Institutions.
6
// (c) This file is part of the Rosetta software suite and is made available under license.
7
// (c) The Rosetta software is developed by the contributing members of the Rosetta Commons.
8
// (c) For more information, see http://www.rosettacommons.org. Questions about this can be
9
// (c) addressed to University of Washington UW TechTransfer, email: license@u.washington.edu.
10
11
/// @file core/fragments/FragData.hh
12
/// @brief A fragment as list of SingleResidue Data
13
/// @author Oliver Lange (olange@u.washington.edu)
14
/// @date Wed Oct 20 12:08:31 2007
15
///
16
#ifndef INCLUDED_core_fragment_SRFD_Implementations_HH
17
#define INCLUDED_core_fragment_SRFD_Implementations_HH
18
19
// Unit Headers
20
#include <
core/fragment/SingleResidueFragData.hh
>
21
22
// Package Headers
23
#include <
core/fragment/Frame.fwd.hh
>
24
25
// Project Headers
26
#include <
core/pose/Pose.hh
>
27
#include <
core/kinematics/MoveMap.fwd.hh
>
28
#include <
core/types.hh
>
29
30
#include <
core/conformation/Residue.hh
>
// for ResidueSRFD
31
32
#include <
core/kinematics/types.hh
>
33
#include <
core/id/TorsionID.hh
>
34
35
// Utility headers
36
#include <utility/vector1.hh>
37
#include <utility/pointer/ReferenceCount.hh>
38
39
40
namespace
core {
41
namespace
fragment {
42
43
/// FURTHER EXAMPLES FOR SRFDs ... ///
44
/*
45
// not used right now
46
class ResidueSRFD : public SingleResidueFragData {
47
public:
48
bool apply( pose::Pose&, Size seq_pos );
49
private:
50
conformation::Residue data_;
51
};
52
53
// very specific
54
class BBProteinTorsionSRFD : public SingleResidueFragData {
55
public:
56
57
private:
58
Real phi_;
59
Real psi_;
60
Real omega_;
61
// should it contain ss-type ? how do we want to handle this now?
62
char secstruct_;
63
};
64
65
66
class RNATorsionSRFD : public BaseTorsionSRFD {
67
//???
68
};
69
*/
70
71
///class GeneralDofSRFD : public SingleResidueFragData {
72
///* similar to the TorsionSRFD but use also the DOF_TYPE */
73
///* CAREFUL: this has to be implemented such that there is no dependence on atom-tree
74
// */
75
/* this, however, might need expansion of the pose interface
76
enum DOF_Type {
77
PHI = 1, // used for lookup into utility::vector1
78
THETA,
79
D,
80
RB1,
81
RB2,
82
RB3,
83
RB4,
84
RB5,
85
RB6
86
}; */
87
//};
88
89
}
//fragment
90
}
//core
91
92
#endif
Generated on Sat Jun 1 2013 11:32:46 for Rosetta 3.5 by
1.8.4