protocols::simple_moves::DOFHistogramRecorder Class Reference

#include <DOFHistogramRecorder.hh>

Collaboration diagram for protocols::simple_moves::DOFHistogramRecorder:

Public Member Functions
	DOFHistogramRecorder ()
	Constructor. More...
	~DOFHistogramRecorder ()
	Destructor. More...
	DOFHistogramRecorder (DOFHistogramRecorder const &)
	Copy constructor. More...
DOFHistogramRecorder &	operator= (DOFHistogramRecorder const &)
	operator= More...
core::Size	num_bins () const
void	num_bins (core::Size num_bins)
void	insert_dofs_by_residue (core::pose::Pose const &pose, utility::vector1< core::id::DOF_ID_Range > dof_ranges)
utility::vector1 < utility::vector1 < core::id::DOF_ID > > const &	dofs () const
utility::vector1 < numeric::MultiDimensionalHistogram > const &	histograms () const
void	update_after_boltzmann (core::pose::Pose const &pose)
void	write_mse_summary (std::ostream &os) const

Private Attributes
utility::vector1 < utility::vector1 < core::id::DOF_ID > >	dofs_
utility::vector1 < numeric::MultiDimensionalHistogram >	histograms_
utility::vector1 < utility::vector1< core::Real > >	dof_values_
numeric::Size	num_bins_

Detailed Description

Definition at line 58 of file DOFHistogramRecorder.hh.

Constructor & Destructor Documentation

protocols::simple_moves::DOFHistogramRecorder::DOFHistogramRecorder

(

)

Constructor.

Definition at line 47 of file DOFHistogramRecorder.cc.

protocols::simple_moves::DOFHistogramRecorder::~DOFHistogramRecorder

(

)

Destructor.

Definition at line 51 of file DOFHistogramRecorder.cc.

protocols::simple_moves::DOFHistogramRecorder::DOFHistogramRecorder

(

DOFHistogramRecorder const &

)

Copy constructor.

Definition at line 54 of file DOFHistogramRecorder.cc.

Member Function Documentation

utility::vector1<utility::vector1<core::id::DOF_ID> > const& protocols::simple_moves::DOFHistogramRecorder::dofs ( ) const

inline

Definition at line 134 of file DOFHistogramRecorder.hh.

References dofs_.

Referenced by insert_dofs_by_residue().

utility::vector1<numeric::MultiDimensionalHistogram> const& protocols::simple_moves::DOFHistogramRecorder::histograms ( ) const

inline

Definition at line 140 of file DOFHistogramRecorder.hh.

References histograms_.

Referenced by protocols::simple_moves::operator<<().

void protocols::simple_moves::DOFHistogramRecorder::insert_dofs_by_residue	(	core::pose::Pose const &	pose,
		utility::vector1< core::id::DOF_ID_Range >	dof_ranges
	)

Definition at line 69 of file DOFHistogramRecorder.cc.

References core::kinematics::AtomTree::atom(), core::pose::Pose::atom_tree(), dof_values_, dofs(), dofs_, core::sequence::end, histograms_, core::chemical::ResidueType::name3(), num_bins_, core::kinematics::tree::Atom::parent(), core::pose::Pose::residue_type(), core::io::serialization::size(), and core::pose::Pose::total_residue().

core::Size protocols::simple_moves::DOFHistogramRecorder::num_bins ( ) const

inline

Definition at line 114 of file DOFHistogramRecorder.hh.

References num_bins_.

Referenced by num_bins().

void protocols::simple_moves::DOFHistogramRecorder::num_bins ( core::Size  num_bins)

inline

Definition at line 120 of file DOFHistogramRecorder.hh.

References num_bins(), and num_bins_.

DOFHistogramRecorder & protocols::simple_moves::DOFHistogramRecorder::operator=

(

DOFHistogramRecorder const &

)

operator=

Definition at line 61 of file DOFHistogramRecorder.cc.

void protocols::simple_moves::DOFHistogramRecorder::update_after_boltzmann

(

core::pose::Pose const &

pose)

Definition at line 118 of file DOFHistogramRecorder.cc.

References core::pose::Pose::dof(), dof_values_, dofs_, and histograms_.

void protocols::simple_moves::DOFHistogramRecorder::write_mse_summary

(

std::ostream &

os)

const

Definition at line 131 of file DOFHistogramRecorder.cc.

References dofs_, histograms_, core::io::serialization::size(), and protocols::simple_moves::uniform_dof_distribution().

Member Data Documentation

utility::vector1<utility::vector1<core::Real> > protocols::simple_moves::DOFHistogramRecorder::dof_values_

private

Definition at line 169 of file DOFHistogramRecorder.hh.

Referenced by insert_dofs_by_residue(), and update_after_boltzmann().

utility::vector1<utility::vector1<core::id::DOF_ID> > protocols::simple_moves::DOFHistogramRecorder::dofs_

private

Definition at line 167 of file DOFHistogramRecorder.hh.

Referenced by dofs(), insert_dofs_by_residue(), update_after_boltzmann(), and write_mse_summary().

utility::vector1<numeric::MultiDimensionalHistogram> protocols::simple_moves::DOFHistogramRecorder::histograms_

private

Definition at line 168 of file DOFHistogramRecorder.hh.

Referenced by histograms(), insert_dofs_by_residue(), update_after_boltzmann(), and write_mse_summary().

numeric::Size protocols::simple_moves::DOFHistogramRecorder::num_bins_

private

Definition at line 170 of file DOFHistogramRecorder.hh.

Referenced by insert_dofs_by_residue(), and num_bins().

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The documentation for this class was generated from the following files:

• src/protocols/simple_moves/DOFHistogramRecorder.hh
• src/protocols/simple_moves/DOFHistogramRecorder.cc