pdb_dynamic_reader_options.cc

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//
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/// @file   core/io/pdb/pdb_dynamic_reader_options.cc
///
/// @brief
/// @author Brian D. Weitzner brian.weitzner@gmail.com

// Unit headers
#include <core/io/pdb/pdb_dynamic_reader_options.hh>

// Basic headers
#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>

// Utility headers
#include <utility/tag/Tag.hh>

// C++ headers

namespace core {
namespace io {
namespace pdb {

PDB_DReaderOptions::PDB_DReaderOptions() { init_from_options(); }

PDB_DReaderOptions::~PDB_DReaderOptions() {}

void PDB_DReaderOptions::parse_my_tag( utility::tag::TagPtr tag )
{
  FileDataOptions::parse_my_tag( tag );
  
  set_new_chain_order(  tag->getOption< bool >( "new_chain_order", 0 ));
  set_obey_ENDMDL(  tag->getOption< bool >( "obey_ENDMDL", 0 ));
}

std::string PDB_DReaderOptions::type() const { return "pdb_dynamic_reader_options"; }

// accessors
bool PDB_DReaderOptions::new_chain_order() const { return new_chain_order_; }
bool PDB_DReaderOptions::obey_ENDMDL() const { return obey_ENDMDL_; }

// mutators
void PDB_DReaderOptions::set_new_chain_order( bool new_chain_order ) { new_chain_order_ = new_chain_order; }
void PDB_DReaderOptions::set_obey_ENDMDL( bool obey_ENDMDL ) { obey_ENDMDL_ = obey_ENDMDL; }


void PDB_DReaderOptions::init_from_options()
{
  using namespace basic::options;
  using namespace basic::options::OptionKeys;
  
  set_new_chain_order( option[ in::file::new_chain_order ]() );
  set_obey_ENDMDL( option[ in::file::obey_ENDMDL ].value() ); 
}

} // namespace pdb
} // namespace io
} // namespace core