protocols::pack_daemon::DenseIGRepacker Class Reference

#include <PackDaemon.hh>

Inheritance diagram for protocols::pack_daemon::DenseIGRepacker:

Collaboration diagram for protocols::pack_daemon::DenseIGRepacker:

Public Types
typedef RotamerSubsetRepacker	parent
typedef core::pack::interaction_graph::DensePDInteractionGraphOP	DensePDInteractionGraphOP
Public Types inherited from protocols::pack_daemon::RotamerSubsetRepacker
typedef core::pack::rotamer_set::RotamerSubsetsOP	RotamerSubsetsOP
typedef QuickRepacker	parent
Public Types inherited from protocols::pack_daemon::QuickRepacker
typedef utility::pointer::ReferenceCount	parent
typedef PackDaemon::RotamerAssignmentAndEnergy	RotamerAssignmentAndEnergy
typedef core::pose::PoseOP	PoseOP
typedef core::pack::task::PackerTaskOP	PackerTaskOP
typedef core::pack::interaction_graph::FixedBBInteractionGraphOP	FixedBBInteractionGraphOP
typedef core::pack::rotamer_set::RotamerSetsOP	RotamerSetsOP

Public Member Functions
	DenseIGRepacker (PoseOP pose, PackerTaskOP task, FixedBBInteractionGraphOP ig, RotamerSetsOP rotsets)
	DENSE IG REPACKER. More...
virtual	~DenseIGRepacker ()
void	set_MCA ()
virtual RotamerAssignmentAndEnergy	repack (utility::vector0< int > const &rot_to_pack)
DensePDInteractionGraphOP	create_dense_pdig_from_rot_to_pack (utility::vector0< int > const &rot_to_pack, RotamerSubsetsOP rot_subsets)
Public Member Functions inherited from protocols::pack_daemon::RotamerSubsetRepacker
	RotamerSubsetRepacker (PoseOP pose, PackerTaskOP task, FixedBBInteractionGraphOP ig, RotamerSetsOP rot_sets)
	~RotamerSubsetRepacker ()
RotamerSubsetsOP	create_rotamer_subsets_from_rot_to_pack (utility::vector0< int > const &rot_to_pack)
Public Member Functions inherited from protocols::pack_daemon::QuickRepacker
	QuickRepacker (PoseOP pose, PackerTaskOP task, FixedBBInteractionGraphOP ig, RotamerSetsOP rot_sets)
virtual	~QuickRepacker ()

Additional Inherited Members
Protected Member Functions inherited from protocols::pack_daemon::QuickRepacker
PoseOP	pose ()
	Read access to derived classes. More...
PackerTaskOP	task ()
FixedBBInteractionGraphOP	ig ()
RotamerSetsOP	rot_sets ()
void	task (PackerTaskOP)

Detailed Description

Definition at line 501 of file PackDaemon.hh.

Member Typedef Documentation

typedef core::pack::interaction_graph::DensePDInteractionGraphOP protocols::pack_daemon::DenseIGRepacker::DensePDInteractionGraphOP

Definition at line 505 of file PackDaemon.hh.

typedef RotamerSubsetRepacker protocols::pack_daemon::DenseIGRepacker::parent

Definition at line 504 of file PackDaemon.hh.

Constructor & Destructor Documentation

protocols::pack_daemon::DenseIGRepacker::DenseIGRepacker	(	PoseOP	pose,
		PackerTaskOP	task,
		FixedBBInteractionGraphOP	ig,
		RotamerSetsOP	rotsets
	)

DENSE IG REPACKER.

Definition at line 1227 of file PackDaemon.cc.

References protocols::pack_daemon::QuickRepacker::ig().

protocols::pack_daemon::DenseIGRepacker::~DenseIGRepacker ( )

virtual

Definition at line 1238 of file PackDaemon.cc.

Member Function Documentation

DenseIGRepacker::DensePDInteractionGraphOP protocols::pack_daemon::DenseIGRepacker::create_dense_pdig_from_rot_to_pack	(	utility::vector0< int > const &	rot_to_pack,
		RotamerSubsetsOP	rot_subsets
	)

Definition at line 1292 of file PackDaemon.cc.

References protocols::pack_daemon::QuickRepacker::ig(), protocols::pack_daemon::QuickRepacker::rot_sets(), and protocols::pack_daemon::TR().

Referenced by repack().

DenseIGRepacker::RotamerAssignmentAndEnergy protocols::pack_daemon::DenseIGRepacker::repack ( utility::vector0< int > const &  rot_to_pack)

virtual

Implements protocols::pack_daemon::QuickRepacker.

Definition at line 1247 of file PackDaemon.cc.

References create_dense_pdig_from_rot_to_pack(), protocols::pack_daemon::RotamerSubsetRepacker::create_rotamer_subsets_from_rot_to_pack(), core::pack::pack_rotamers_run(), protocols::pack_daemon::QuickRepacker::pose(), protocols::pack_daemon::QuickRepacker::rot_sets(), and protocols::pack_daemon::QuickRepacker::task().

void protocols::pack_daemon::DenseIGRepacker::set_MCA

(

)

Definition at line 1240 of file PackDaemon.cc.

References protocols::pack_daemon::QuickRepacker::task().

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The documentation for this class was generated from the following files:

• src/protocols/pack_daemon/PackDaemon.hh
• src/protocols/pack_daemon/PackDaemon.cc