protocols::simple_moves::FavorSequenceProfile Member List

This is the complete list of members for protocols::simple_moves::FavorSequenceProfile, including all inherited members.

apply(core::pose::Pose &pose)	protocols::simple_moves::FavorSequenceProfile	virtual
protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap)	protocols::moves::Mover	virtual
chain_	protocols::simple_moves::FavorSequenceProfile	private
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const	protocols::simple_moves::FavorSequenceProfile	inlinevirtual
create()	protocols::moves::Mover	virtual
FavorSequenceProfile()	protocols::simple_moves::FavorSequenceProfile
Filters_map typedef	protocols::moves::Mover
fresh_instance() const	protocols::simple_moves::FavorSequenceProfile	inlinevirtual
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const	protocols::simple_moves::FavorSequenceProfile	inlinevirtual
get_native_pose() const	protocols::moves::Mover
get_type() const	protocols::moves::Mover	inline
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
matrix_	protocols::simple_moves::FavorSequenceProfile	private
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
Mover(Mover const &other)	protocols::moves::Mover
name()	protocols::moves::Mover	inlinestatic
operator=(Mover const &other)	protocols::moves::Mover
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, protocols::moves::MoverCacheSP cache)	protocols::simple_moves::FavorSequenceProfile	virtual
parse_my_tag(utility::tag::TagPtr const tag, protocols::moves::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)	protocols::simple_moves::FavorSequenceProfile	virtual
parse_state(SerializableState const &state)	protocols::moves::Mover	virtual
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
ref_profile_	protocols::simple_moves::FavorSequenceProfile	private
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
save_state(SerializableState &state)	protocols::moves::Mover	virtual
scaling_	protocols::simple_moves::FavorSequenceProfile	private
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inline
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_profile(core::sequence::SequenceProfile &profile)	protocols::simple_moves::FavorSequenceProfile
set_scaling(std::string const &scaling)	protocols::simple_moves::FavorSequenceProfile
set_sequence(core::sequence::Sequence &seq, std::string matrix)	protocols::simple_moves::FavorSequenceProfile
set_weight(core::Real weight)	protocols::simple_moves::FavorSequenceProfile
Strings typedef	protocols::moves::Mover
TagPtr typedef	protocols::moves::Mover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
type() const	protocols::moves::Mover	inline
type(const std::string &type_in)	protocols::moves::Mover	inline
use_current_	protocols::simple_moves::FavorSequenceProfile	private
weight_	protocols::simple_moves::FavorSequenceProfile	private
~FavorSequenceProfile()	protocols::simple_moves::FavorSequenceProfile	inlinevirtual
~Mover()	protocols::moves::Mover	virtual