#include <BatchFeatures.hh>

Inheritance diagram for protocols::features::BatchFeatures:

Collaboration diagram for protocols::features::BatchFeatures:

Public Member Functions
	BatchFeatures ()

	BatchFeatures (BatchFeatures const &src)

virtual	~BatchFeatures ()

std::string	type_name () const
	return string with class name More...

virtual void	write_schema_to_db (utility::sql_database::sessionOP db_session) const
	generate the table schemas and write them to the database More...

utility::vector1< std::string >	features_reporter_dependencies () const
	return the set of features reporters that are required to also already be extracted by the time this one is used. More...

std::string	indices () const
	return sql statements that setup helpful indices on the tables More...

core::Size	report_features (core::Size batch_id, core::Size protocol_id, std::string name, std::string description, utility::sql_database::sessionOP db_session)
	return sql statments that add indexes check invariants etc. More...

core::Size	report_features (core::pose::Pose const &, utility::vector1< bool > const &, boost::uuids::uuid, utility::sql_database::sessionOP)
	collect all the feature data for the pose. More...

Public Member Functions inherited from protocols::features::FeaturesReporter
virtual	~FeaturesReporter ()
	Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...

virtual std::string	schema () const
	return sql statements that sets up the appropriate tables to contain the features. This should be removed once everything has been moved to the schema generator More...

core::Size	report_features (core::pose::Pose const &, boost::uuids::uuid, utility::sql_database::sessionOP)
	collect all the feature data for the pose. More...

virtual void	parse_my_tag (utility::tag::TagPtr const tag, protocols::moves::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)

virtual void	load_into_pose (utility::sql_database::sessionOP, boost::uuids::uuid, core::pose::Pose &)

virtual void	delete_record (boost::uuids::uuid, utility::sql_database::sessionOP)

Additional Inherited Members
Protected Member Functions inherited from protocols::features::FeaturesReporter
std::string	find_tag (core::pose::Pose const &pose) const

void	delete_records_from_table (std::string const &table_name, boost::uuids::uuid struct_id, utility::sql_database::sessionOP db_session)
	a helper function for deleting data associated with a given structure from feature database WARNING table_name must be sanitized! More...

Detailed Description

Definition at line 35 of file BatchFeatures.hh.

Constructor & Destructor Documentation

protocols::features::BatchFeatures::BatchFeatures ( )

Definition at line 61 of file BatchFeatures.cc.

protocols::features::BatchFeatures::BatchFeatures ( BatchFeatures const & src)

Definition at line 63 of file BatchFeatures.cc.

protocols::features::BatchFeatures::~BatchFeatures ( )

virtual

Definition at line 67 of file BatchFeatures.cc.

Member Function Documentation

utility::vector1< std::string > protocols::features::BatchFeatures::features_reporter_dependencies ( ) const

virtual

return the set of features reporters that are required to also already be extracted by the time this one is used.

Reimplemented from protocols::features::FeaturesReporter.

Definition at line 98 of file BatchFeatures.cc.

string protocols::features::BatchFeatures::indices ( ) const

return sql statements that setup helpful indices on the tables

Definition at line 106 of file BatchFeatures.cc.

core::Size protocols::features::BatchFeatures::report_features	(	core::Size	batch_id,
		core::Size	protocol_id,
		std::string	name,
		std::string	description,
		utility::sql_database::sessionOP	db_session
	)

return sql statments that add indexes check invariants etc.

core::Size protocols::features::BatchFeatures::report_features	(	core::pose::Pose const &	,
		utility::vector1< bool > const &	,
		boost::uuids::uuid	,
		utility::sql_database::sessionOP
	)