protocols::grafting::GraftMoverBase Member List

This is the complete list of members for protocols::grafting::GraftMoverBase, including all inherited members.

apply(core::io::serialization::PipeMap &pmap)	protocols::moves::Mover	virtual
apply(Pose &)=0	protocols::moves::Mover	pure virtual
cen_scorefxn_	protocols::grafting::GraftMoverBase	protected
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const	protocols::moves::Mover	virtual
combine_movemaps(MoveMap const &scaffold_mm, MoveMap const &insert_mm)	protocols::grafting::GraftMoverBase	protected
create()	protocols::moves::Mover	virtual
Cter_insert_flexibility_	protocols::grafting::GraftMoverBase	protected
Cter_loop_end_	protocols::grafting::GraftMoverBase	protected
Cter_loop_start_	protocols::grafting::GraftMoverBase	protected
Cter_overhang_	protocols::grafting::GraftMoverBase	protected
Cter_scaffold_flexibility_	protocols::grafting::GraftMoverBase	protected
delete_overhang_residues()	protocols::grafting::GraftMoverBase	protected
end_	protocols::grafting::GraftMoverBase	protected
fa_scorefxn_	protocols::grafting::GraftMoverBase	protected
Filters_map typedef	protocols::moves::Mover
fresh_instance() const	protocols::moves::Mover	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const	protocols::grafting::GraftMoverBase	virtual
get_native_pose() const	protocols::moves::Mover
get_type() const	protocols::moves::Mover	inline
GraftMoverBase(Size const start, Size const end, std::string mover_name)	protocols::grafting::GraftMoverBase
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
insert_movemap_	protocols::grafting::GraftMoverBase	protected
insert_piece(Pose const &pose)	protocols::grafting::GraftMoverBase	protected
insertion_length_	protocols::grafting::GraftMoverBase	protected
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
movemap_	protocols::grafting::GraftMoverBase	protected
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
Mover(Mover const &other)	protocols::moves::Mover
name()	protocols::moves::Mover	inlinestatic
Nter_insert_flexibility_	protocols::grafting::GraftMoverBase	protected
Nter_loop_end_	protocols::grafting::GraftMoverBase	protected
Nter_loop_start_	protocols::grafting::GraftMoverBase	protected
Nter_overhang_	protocols::grafting::GraftMoverBase	protected
Nter_scaffold_flexibility_	protocols::grafting::GraftMoverBase	protected
operator=(Mover const &other)	protocols::moves::Mover
original_end_	protocols::grafting::GraftMoverBase	protected
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache)	protocols::moves::Mover	virtual
parse_my_tag(TagPtr const tag, DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose)	protocols::moves::Mover	virtual
parse_state(SerializableState const &state)	protocols::moves::Mover	virtual
perturb_backbone_for_test(Pose &pose, MoveMapOP mm)	protocols::grafting::GraftMoverBase	protectedvirtual
piece_	protocols::grafting::GraftMoverBase	protected
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
save_state(SerializableState &state)	protocols::moves::Mover	virtual
scaffold_movemap_	protocols::grafting::GraftMoverBase	protected
set_cen_scorefunction(core::scoring::ScoreFunctionOP score)	protocols::grafting::GraftMoverBase	virtual
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inline
set_default_cen_scorefunction()	protocols::grafting::GraftMoverBase	virtual
set_default_fa_scorefunction()	protocols::grafting::GraftMoverBase	virtual
set_default_movemap()	protocols::grafting::GraftMoverBase	protectedvirtual
set_fa_scorefunction(core::scoring::ScoreFunctionOP score)	protocols::grafting::GraftMoverBase	virtual
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_insert_region(Size const start, Size const end)	protocols::grafting::GraftMoverBase	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_overhang(Size Nter_overhang, Size Cter_overhang)	protocols::grafting::GraftMoverBase	protected
set_piece(Pose &piece, Size Nter_overhang, Size Cter_overhang)	protocols::grafting::GraftMoverBase	virtual
set_regions_from_flexibility()	protocols::grafting::GraftMoverBase	protectedvirtual
set_regions_from_movemap(Pose &pose)	protocols::grafting::GraftMoverBase	protectedvirtual
setup_movemap_and_regions(Pose &pose)	protocols::grafting::GraftMoverBase	protectedvirtual
setup_single_loop_double_arm_remodeling_foldtree(Pose &pose, Size const Nter_loop_start, Size const Cter_loop_end, bool loop_modeling=false)	protocols::grafting::GraftMoverBase	protectedvirtual
setup_single_loop_single_arm_remodeling_foldtree(Pose &pose, Size const Nter_loop_start, Size const Cter_loop_end, bool loop_modeling=false)	protocols::grafting::GraftMoverBase	protectedvirtual
start_	protocols::grafting::GraftMoverBase	protected
Strings typedef	protocols::moves::Mover
superimpose_overhangs_heavy(Pose const &pose, bool ca_only, bool silence_rms)	protocols::grafting::GraftMoverBase
TagPtr typedef	protocols::moves::Mover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
type() const	protocols::moves::Mover	inline
type(const std::string &type_in)	protocols::moves::Mover	inline
use_default_movemap_	protocols::grafting::GraftMoverBase	protected
~GraftMoverBase()	protocols::grafting::GraftMoverBase	virtual
~Mover()	protocols::moves::Mover	virtual