protocols::protein_interface_design::movers::ResidueBBDofs Class Reference

container for BBDofs, providing a convenient operator [], size, other methods and iterators that allow splice to treat ResidueBBDofs as a simple vector (even though it contains other elements as well) More...

#include <Splice.hh>

Inheritance diagram for protocols::protein_interface_design::movers::ResidueBBDofs:

Collaboration diagram for protocols::protein_interface_design::movers::ResidueBBDofs:

Public Types
typedef utility::vector1< BBDofs >	bbdof_list
typedef bbdof_list::iterator	iterator
typedef bbdof_list::const_iterator	const_iterator

Public Member Functions
	ResidueBBDofs ()
virtual	~ResidueBBDofs ()
void	cut_site (core::Size const c)
core::Size	cut_site () const
void	clear ()
void	push_back (BBDofs const b)
const_iterator	begin () const
const_iterator	end () const
iterator	begin ()
iterator	end ()
core::Size	size () const
BBDofs &	operator[] (int const i)
core::Size	start_loop () const
void	start_loop (core::Size const s)
core::Size	stop_loop () const
void	stop_loop (core::Size const s)
std::string	source_pdb () const
void	source_pdb (std::string const s)

Private Attributes
core::Size	cut_site_
core::Size	start_loop_
core::Size	stop_loop_
bbdof_list	bbdofs_
std::string	source_pdb_

Detailed Description

container for BBDofs, providing a convenient operator [], size, other methods and iterators that allow splice to treat ResidueBBDofs as a simple vector (even though it contains other elements as well)

Definition at line 60 of file Splice.hh.

Member Typedef Documentation

typedef utility::vector1< BBDofs > protocols::protein_interface_design::movers::ResidueBBDofs::bbdof_list

Definition at line 63 of file Splice.hh.

typedef bbdof_list::const_iterator protocols::protein_interface_design::movers::ResidueBBDofs::const_iterator

Definition at line 65 of file Splice.hh.

typedef bbdof_list::iterator protocols::protein_interface_design::movers::ResidueBBDofs::iterator

Definition at line 64 of file Splice.hh.

Constructor & Destructor Documentation

protocols::protein_interface_design::movers::ResidueBBDofs::ResidueBBDofs ( )

inline

Definition at line 67 of file Splice.hh.

References clear().

protocols::protein_interface_design::movers::ResidueBBDofs::~ResidueBBDofs ( )

virtual

Definition at line 1017 of file Splice.cc.

Member Function Documentation

const_iterator protocols::protein_interface_design::movers::ResidueBBDofs::begin ( ) const

inline

Definition at line 73 of file Splice.hh.

References bbdofs_.

iterator protocols::protein_interface_design::movers::ResidueBBDofs::begin ( )

inline

Definition at line 75 of file Splice.hh.

References bbdofs_.

void protocols::protein_interface_design::movers::ResidueBBDofs::clear ( )

inline

Definition at line 71 of file Splice.hh.

References bbdofs_.

Referenced by protocols::protein_interface_design::movers::Splice::apply(), protocols::protein_interface_design::movers::Splice::read_torsion_database(), and ResidueBBDofs().

void protocols::protein_interface_design::movers::ResidueBBDofs::cut_site ( core::Size const  c)

inline

Definition at line 69 of file Splice.hh.

References core::pack::dunbrack::c, and cut_site_.

Referenced by protocols::protein_interface_design::movers::Splice::read_torsion_database().

core::Size protocols::protein_interface_design::movers::ResidueBBDofs::cut_site ( ) const

inline

Definition at line 70 of file Splice.hh.

References cut_site_.

const_iterator protocols::protein_interface_design::movers::ResidueBBDofs::end ( ) const

inline

Definition at line 74 of file Splice.hh.

References bbdofs_.

iterator protocols::protein_interface_design::movers::ResidueBBDofs::end ( )

inline

Definition at line 76 of file Splice.hh.

References bbdofs_.

BBDofs& protocols::protein_interface_design::movers::ResidueBBDofs::operator[] ( int const  i)

inline

Definition at line 78 of file Splice.hh.

References bbdofs_.

void protocols::protein_interface_design::movers::ResidueBBDofs::push_back ( BBDofs const  b)

inline

Definition at line 72 of file Splice.hh.

References bbdofs_.

Referenced by protocols::protein_interface_design::movers::Splice::read_torsion_database().

core::Size protocols::protein_interface_design::movers::ResidueBBDofs::size ( ) const

inline

Definition at line 77 of file Splice.hh.

References bbdofs_.

Referenced by protocols::protein_interface_design::movers::Splice::find_dbase_entry().

std::string protocols::protein_interface_design::movers::ResidueBBDofs::source_pdb ( ) const

inline

Definition at line 83 of file Splice.hh.

References source_pdb_.

Referenced by protocols::protein_interface_design::movers::Splice::read_torsion_database().

void protocols::protein_interface_design::movers::ResidueBBDofs::source_pdb ( std::string const  s)

inline

Definition at line 84 of file Splice.hh.

References source_pdb_.

core::Size protocols::protein_interface_design::movers::ResidueBBDofs::start_loop ( ) const

inline

Definition at line 79 of file Splice.hh.

References start_loop_.

Referenced by protocols::protein_interface_design::movers::Splice::find_dbase_entry(), and protocols::protein_interface_design::movers::Splice::read_torsion_database().

void protocols::protein_interface_design::movers::ResidueBBDofs::start_loop ( core::Size const  s)

inline

Definition at line 80 of file Splice.hh.

References start_loop_.

core::Size protocols::protein_interface_design::movers::ResidueBBDofs::stop_loop ( ) const

inline

Definition at line 81 of file Splice.hh.

References stop_loop_.

Referenced by protocols::protein_interface_design::movers::Splice::find_dbase_entry(), and protocols::protein_interface_design::movers::Splice::read_torsion_database().

void protocols::protein_interface_design::movers::ResidueBBDofs::stop_loop ( core::Size const  s)

inline

Definition at line 82 of file Splice.hh.

References stop_loop_.

Member Data Documentation

bbdof_list protocols::protein_interface_design::movers::ResidueBBDofs::bbdofs_

private

Definition at line 87 of file Splice.hh.

Referenced by begin(), clear(), end(), operator[](), push_back(), and size().

core::Size protocols::protein_interface_design::movers::ResidueBBDofs::cut_site_

private

Definition at line 86 of file Splice.hh.

Referenced by cut_site().

std::string protocols::protein_interface_design::movers::ResidueBBDofs::source_pdb_

private

Definition at line 88 of file Splice.hh.

Referenced by source_pdb().

core::Size protocols::protein_interface_design::movers::ResidueBBDofs::start_loop_

private

Definition at line 86 of file Splice.hh.

Referenced by start_loop().

core::Size protocols::protein_interface_design::movers::ResidueBBDofs::stop_loop_

private

Definition at line 86 of file Splice.hh.

Referenced by stop_loop().

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The documentation for this class was generated from the following files:

• src/protocols/protein_interface_design/movers/Splice.hh
• src/protocols/protein_interface_design/movers/Splice.cc