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core::pack::rotamer_set::symmetry::SymmetricRotamerSet_ Member List

This is the complete list of members for core::pack::rotamer_set::symmetry::SymmetricRotamerSet_, including all inherited members.

add_rotamer(conformation::Residue const &rotamer)core::pack::rotamer_set::RotamerSet_virtual
BasicDataCache typedefcore::conformation::RotamerSetBase
BasicDataCacheOP typedefcore::conformation::RotamerSetBase
begin() const core::pack::rotamer_set::RotamerSet_inlinevirtual
build_dependent_rotamers(RotamerSets const &rotamer_sets, pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, graph::GraphCOP packer_neighbor_graph)core::pack::rotamer_set::RotamerSet_virtual
build_dependent_rotamers_for_concrete(RotamerSets const &rotamer_sets, pose::Pose const &pose, scoring::ScoreFunction const &, task::PackerTask const &task, conformation::Residue const &existing_residue, chemical::ResidueTypeCOP concrete_residue, graph::GraphCOP packer_neighbor_graph)core::pack::rotamer_set::RotamerSet_protected
build_optimize_H_rotamers(pose::Pose const &pose, task::PackerTask const &task, chemical::ResidueTypeCOP concrete_residue, conformation::Residue const &existing_residue)core::pack::rotamer_set::RotamerSet_protected
build_rotamers(pose::Pose const &the_pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, graph::GraphCOP packer_neighbor_graph, bool use_neighbor_context=true)core::pack::rotamer_set::RotamerSet_virtual
build_rotamers_for_concrete(pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, chemical::ResidueTypeCOP concrete_residue, conformation::Residue const &existing_residue, graph::GraphCOP packer_neighbor_graph, bool use_neighbor_context=true)core::pack::rotamer_set::RotamerSet_protected
build_rotamers_for_concrete_virt(pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, chemical::ResidueTypeCOP concrete_residue, graph::GraphCOP packer_neighbor_graph, bool use_neighbor_context=true)core::pack::rotamer_set::RotamerSet_protectedvirtual
bump_check(ResidueCOP rotamer, scoring::ScoreFunction const &sf, pose::Pose const &pose, task::PackerTask const &task, graph::GraphCOP packer_neighbor_graph) const core::pack::rotamer_set::RotamerSet_virtual
ChiSetOP typedefcore::pack::rotamer_set::RotamerSet_
compute_one_body_energies(pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, graph::GraphCOP packer_neighbor_graph, utility::vector1< core::PackerEnergy > &energies) const core::pack::rotamer_set::symmetry::SymmetricRotamerSet_virtual
compute_one_body_energy_maps(pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, graph::GraphCOP packer_neighbor_graph, utility::vector1< scoring::EnergyMap > &energies) const core::pack::rotamer_set::RotamerSet_virtual
data()core::conformation::RotamerSetBase
data() const core::conformation::RotamerSetBase
drop_rotamer(Size rot_id)core::pack::rotamer_set::RotamerSet_virtual
drop_rotamers(utility::vector1< bool > const &rotamers_to_delete)core::pack::rotamer_set::RotamerSet_virtual
drop_rotamers_by_index(utility::vector1< Size > const &rotamer_indices_to_delete)core::pack::rotamer_set::RotamerSet_virtual
end() const core::pack::rotamer_set::RotamerSet_inlinevirtual
get_n_residue_groups() const core::pack::rotamer_set::RotamerSet_virtual
get_n_residue_types() const core::pack::rotamer_set::RotamerSet_virtual
get_n_rotamers_for_residue_group(Size which_resgroup) const core::pack::rotamer_set::RotamerSet_virtual
get_n_rotamers_for_residue_type(Size which_resgroup) const core::pack::rotamer_set::RotamerSet_virtual
get_residue_group_begin(Size which_resgroup) const core::pack::rotamer_set::RotamerSet_virtual
get_residue_group_index_for_rotamer(Size which_rotamer) const core::pack::rotamer_set::RotamerSet_virtual
get_residue_type_begin(Size which_restype) const core::pack::rotamer_set::RotamerSet_virtual
get_residue_type_index_for_rotamer(Size which_rotamer) const core::pack::rotamer_set::RotamerSet_virtual
get_trie(Size method_enum_id) const core::pack::rotamer_set::RotamerSet_virtual
id_for_current_rotamer() const core::pack::rotamer_set::RotamerSet_virtual
nonconst_rotamer(Size rot_id)core::pack::rotamer_set::RotamerSet_virtual
num_rotamers() const core::pack::rotamer_set::RotamerSet_virtual
orient_rotamer_set_to_symmetric_partner(pose::Pose const &pose, conformation::ResidueOP residue_in, int const &sympos, RotamerSetOP rotset_in) const core::pack::rotamer_set::symmetry::SymmetricRotamerSet_
PackerEnergyAdd(utility::vector1< core::PackerEnergy > &energies, utility::vector1< core::PackerEnergy > const &add) const core::pack::rotamer_set::symmetry::SymmetricRotamerSet_
PackerEnergyMultiply(utility::vector1< core::PackerEnergy > &energies, core::Size factor) const core::pack::rotamer_set::symmetry::SymmetricRotamerSet_
PackerEnergySubtract(utility::vector1< core::PackerEnergy > &energies, utility::vector1< core::PackerEnergy > const &subtract) const core::pack::rotamer_set::symmetry::SymmetricRotamerSet_
resid() const core::pack::rotamer_set::RotamerSetinlinevirtual
ResidueCOP typedefcore::pack::rotamer_set::RotamerSet_
ResidueOP typedefcore::pack::rotamer_set::RotamerSet_
rotamer(Size rot_id) const core::pack::rotamer_set::RotamerSet_virtual
RotamerSet()core::pack::rotamer_set::RotamerSet
RotamerSet_()core::pack::rotamer_set::RotamerSet_
RotamerSetBase()core::conformation::RotamerSetBase
RotamerTrieBaseOP typedefcore::pack::rotamer_set::RotamerSet_
set_extra_samples(task::PackerTask const &task, int num_10A_neighbors, int chi, chemical::ResidueTypeCOP concrete_residue, utility::vector1< Real > &extra_chi_steps) const core::pack::rotamer_set::RotamerSet_
set_resid(Size resid)core::pack::rotamer_set::RotamerSet
store_trie(Size method_enum_id, conformation::AbstractRotamerTrieOP trie)core::pack::rotamer_set::RotamerSet_virtual
SymmetricConformation typedefcore::pack::rotamer_set::symmetry::SymmetricRotamerSet_
SymmetricRotamerSet_()core::pack::rotamer_set::symmetry::SymmetricRotamerSet_
SymmetryInfoCOP typedefcore::pack::rotamer_set::symmetry::SymmetricRotamerSet_
~RotamerSet()core::pack::rotamer_set::RotamerSetvirtual
~RotamerSet_()core::pack::rotamer_set::RotamerSet_virtual
~RotamerSetBase()core::conformation::RotamerSetBasevirtual
~SymmetricRotamerSet_()core::pack::rotamer_set::symmetry::SymmetricRotamerSet_virtual
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