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core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior > Class Template Reference

#include <CountPair1B.fwd.hh>

Inheritance diagram for core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >:
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Collaboration diagram for core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >:
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Public Types

typedef CrossoverBehavior parent
 

Public Member Functions

 CountPair1B (conformation::Residue const &res1, Size const res1_connect_atom, conformation::Residue const &res2, Size const res2_connect_atom)
 take a row from the path distances table to retrieve the lower and upper path distances for all atoms in each residue More...
 
virtual ~CountPair1B ()
 
bool operator() (int const at1, int const at2, Real &weight, Size &path_dist) const
 function required by templated functions in atom_pair_energy_inline More...
 
virtual bool count (int const at1, int const at2, Real &, Size &path_dist) const
 
virtual void residue_atom_pair_energy (conformation::Residue const &res1, conformation::Residue const &res2, etable::TableLookupEvaluator const &, EnergyMap &) const
 Type Resolution Functions ///. More...
 
virtual void residue_atom_pair_energy_sidechain_backbone (conformation::Residue const &, conformation::Residue const &, etable::TableLookupEvaluator const &, EnergyMap &) const
 
virtual void residue_atom_pair_energy_sidechain_whole (conformation::Residue const &, conformation::Residue const &, etable::TableLookupEvaluator const &, EnergyMap &) const
 
virtual void residue_atom_pair_energy_backbone_backbone (conformation::Residue const &, conformation::Residue const &, etable::TableLookupEvaluator const &, EnergyMap &) const
 
virtual void residue_atom_pair_energy_sidechain_sidechain (conformation::Residue const &, conformation::Residue const &, etable::TableLookupEvaluator const &, EnergyMap &) const
 
virtual void residue_atom_pair_energy (conformation::Residue const &res1, conformation::Residue const &res2, etable::AnalyticEtableEvaluator const &, EnergyMap &) const
 
virtual void residue_atom_pair_energy_sidechain_backbone (conformation::Residue const &, conformation::Residue const &, etable::AnalyticEtableEvaluator const &, EnergyMap &) const
 
virtual void residue_atom_pair_energy_sidechain_whole (conformation::Residue const &, conformation::Residue const &, etable::AnalyticEtableEvaluator const &, EnergyMap &) const
 
virtual void residue_atom_pair_energy_backbone_backbone (conformation::Residue const &, conformation::Residue const &, etable::AnalyticEtableEvaluator const &, EnergyMap &) const
 
virtual void residue_atom_pair_energy_sidechain_sidechain (conformation::Residue const &, conformation::Residue const &, etable::AnalyticEtableEvaluator const &, EnergyMap &) const
 

Private Attributes

utility::vector1< int > const & res1_conn_dist_
 
utility::vector1< int > const & res2_conn_dist_
 

Detailed Description

template<class CrossoverBehavior>
class core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >

Definition at line 24 of file CountPair1B.fwd.hh.

Member Typedef Documentation

template<class CrossoverBehavior>
typedef CrossoverBehavior core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::parent

Definition at line 44 of file CountPair1B.hh.

Constructor & Destructor Documentation

template<class CrossoverBehavior >
core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::CountPair1B ( conformation::Residue const &  res1,
Size const  res1_connect_atom,
conformation::Residue const &  res2,
Size const  res2_connect_atom 
)

take a row from the path distances table to retrieve the lower and upper path distances for all atoms in each residue

Definition at line 191 of file CountPair1B.hh.

template<class CrossoverBehavior>
virtual core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::~CountPair1B ( )
inlinevirtual

Definition at line 54 of file CountPair1B.hh.

Member Function Documentation

template<class CrossoverBehavior >
bool core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::count ( int const  at1,
int const  at2,
Real &  w,
Size &  path_dist 
) const
virtual

Definition at line 205 of file CountPair1B.hh.

template<class CrossoverBehavior>
bool core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::operator() ( int const  at1,
int const  at2,
Real &  weight,
Size &  path_dist 
) const
inline

function required by templated functions in atom_pair_energy_inline

Definition at line 59 of file CountPair1B.hh.

References core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::res1_conn_dist_, and core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::res2_conn_dist_.

template<class CrossoverBehavior >
void core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::residue_atom_pair_energy ( conformation::Residue const &  res1,
conformation::Residue const &  res2,
etable::TableLookupEvaluator const &  etable_energy,
EnergyMap &  emap 
) const
virtual

Type Resolution Functions ///.

Definition at line 217 of file CountPair1B.hh.

References core::scoring::inline_residue_atom_pair_energy().

template<class CrossoverBehavior >
void core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::residue_atom_pair_energy ( conformation::Residue const &  res1,
conformation::Residue const &  res2,
etable::AnalyticEtableEvaluator const &  etable_energy,
EnergyMap &  emap 
) const
virtual

Definition at line 280 of file CountPair1B.hh.

References core::scoring::inline_residue_atom_pair_energy().

template<class CrossoverBehavior >
void core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::residue_atom_pair_energy_backbone_backbone ( conformation::Residue const &  res1,
conformation::Residue const &  res2,
etable::TableLookupEvaluator const &  etable_energy,
EnergyMap &  emap 
) const
virtual

Definition at line 255 of file CountPair1B.hh.

References core::scoring::inline_residue_atom_pair_energy_backbone_backbone().

template<class CrossoverBehavior >
void core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::residue_atom_pair_energy_backbone_backbone ( conformation::Residue const &  res1,
conformation::Residue const &  res2,
etable::AnalyticEtableEvaluator const &  etable_energy,
EnergyMap &  emap 
) const
virtual

Definition at line 318 of file CountPair1B.hh.

References core::scoring::inline_residue_atom_pair_energy_backbone_backbone().

template<class CrossoverBehavior >
void core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::residue_atom_pair_energy_sidechain_backbone ( conformation::Residue const &  res1,
conformation::Residue const &  res2,
etable::TableLookupEvaluator const &  etable_energy,
EnergyMap &  emap 
) const
virtual

Definition at line 230 of file CountPair1B.hh.

References core::scoring::inline_residue_atom_pair_energy_sidechain_backbone().

template<class CrossoverBehavior >
void core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::residue_atom_pair_energy_sidechain_backbone ( conformation::Residue const &  res1,
conformation::Residue const &  res2,
etable::AnalyticEtableEvaluator const &  etable_energy,
EnergyMap &  emap 
) const
virtual

Definition at line 293 of file CountPair1B.hh.

References core::scoring::inline_residue_atom_pair_energy_sidechain_backbone().

template<class CrossoverBehavior >
void core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::residue_atom_pair_energy_sidechain_sidechain ( conformation::Residue const &  res1,
conformation::Residue const &  res2,
etable::TableLookupEvaluator const &  etable_energy,
EnergyMap &  emap 
) const
virtual

Definition at line 268 of file CountPair1B.hh.

References core::scoring::inline_residue_atom_pair_energy_sidechain_sidechain().

template<class CrossoverBehavior >
void core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::residue_atom_pair_energy_sidechain_sidechain ( conformation::Residue const &  res1,
conformation::Residue const &  res2,
etable::AnalyticEtableEvaluator const &  etable_energy,
EnergyMap &  emap 
) const
virtual

Definition at line 331 of file CountPair1B.hh.

References core::scoring::inline_residue_atom_pair_energy_sidechain_sidechain().

template<class CrossoverBehavior >
void core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::residue_atom_pair_energy_sidechain_whole ( conformation::Residue const &  res1,
conformation::Residue const &  res2,
etable::TableLookupEvaluator const &  etable_energy,
EnergyMap &  emap 
) const
virtual

Definition at line 243 of file CountPair1B.hh.

References core::scoring::inline_residue_atom_pair_energy_sidechain_whole().

template<class CrossoverBehavior >
void core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::residue_atom_pair_energy_sidechain_whole ( conformation::Residue const &  res1,
conformation::Residue const &  res2,
etable::AnalyticEtableEvaluator const &  etable_energy,
EnergyMap &  emap 
) const
virtual

Definition at line 306 of file CountPair1B.hh.

References core::scoring::inline_residue_atom_pair_energy_sidechain_whole().

Member Data Documentation

template<class CrossoverBehavior>
utility::vector1< int > const& core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::res1_conn_dist_
private

Definition at line 181 of file CountPair1B.hh.

Referenced by core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::operator()().

template<class CrossoverBehavior>
utility::vector1< int > const& core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::res2_conn_dist_
private

Definition at line 182 of file CountPair1B.hh.

Referenced by core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >::operator()().

The documentation for this class was generated from the following files:
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