| cached_score(FragmentCandidateOP, FragmentScoreMapOP) | protocols::frag_picker::scores::ProfileScore | virtual |
| CachingScoringMethod(Size priority, Real lowest_acceptable_value, bool use_lowest, std::string name) | protocols::frag_picker::scores::CachingScoringMethod | inline |
| clean_up() | protocols::frag_picker::scores::ScoreEValuator | virtual |
| describe_score(FragmentCandidateOP f, FragmentScoreMapOP empty_map, std::ostream &out) | protocols::frag_picker::scores::ProfileScore | |
| do_caching(VallChunkOP) | protocols::frag_picker::scores::ScoreEValuator | virtual |
| FragmentScoringMethod(Size priority, Real lowest_acceptable_value, bool use_lowest, std::string name) | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_id() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_min_allowed_score() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_priority() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_score_name() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_use_lowest() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| id_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
| lowest_acceptable_value_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
| max_rand_ | protocols::frag_picker::scores::ScoreEValuator | private |
| name_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
| priority_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
| ProfileScore(Size priority, Real lowest_acceptable_value, bool use_lowest, sequence::SequenceProfileOP query_profile, sequence::ScoringSchemeOP profile_scoring, Size longest_vall_chunk) | protocols::frag_picker::scores::ProfileScore | inline |
| score(FragmentCandidateOP, FragmentScoreMapOP) | protocols::frag_picker::scores::ScoreEValuator | virtual |
| ScoreEValuator(Size priority, Real lowest_acceptable_value, bool use_lowest, sequence::SequenceProfileOP query_profile, sequence::ScoringSchemeOP profile_scoring, Size largest_chunk_size) | protocols::frag_picker::scores::ScoreEValuator | inline |
| scores_ | protocols::frag_picker::scores::ProfileScore | protected |
| set_id(Size id) | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| set_min_allowed_score(Real lowest_acceptable_value) | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| use_lowest_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
| ~ProfileScore() | protocols::frag_picker::scores::ProfileScore | |