protocols::frag_picker::JCouplingIO Class Reference

#include <JCouplingIO.hh>

Collaboration diagram for protocols::frag_picker::JCouplingIO:

Public Member Functions
	JCouplingIO ()
	JCouplingIO (std::string file_name)
void	read (std::string const &)
std::pair< Real, Real >	get_data (Size const res_num, bool &has_data)
utility::vector1< Real >	get_parameters ()
Size	get_length ()

Private Attributes
utility::vector1 < utility::vector1< Real > >	data_
Real	A_
Real	B_
Real	C_
Real	THETA_
Size	sequence_length_

Detailed Description

Definition at line 34 of file JCouplingIO.hh.

Constructor & Destructor Documentation

protocols::frag_picker::JCouplingIO::JCouplingIO ( )

inline

Definition at line 37 of file JCouplingIO.hh.

protocols::frag_picker::JCouplingIO::JCouplingIO ( std::string  file_name)

inline

Definition at line 39 of file JCouplingIO.hh.

Member Function Documentation

std::pair< Real, Real > protocols::frag_picker::JCouplingIO::get_data	(	Size const	res_num,
		bool &	has_data
	)

Definition at line 89 of file JCouplingIO.cc.

References core::io::serialization::size().

Referenced by protocols::frag_picker::scores::JCoupling::score().

Size protocols::frag_picker::JCouplingIO::get_length ( )

inline

Definition at line 49 of file JCouplingIO.hh.

Referenced by protocols::frag_picker::scores::JCoupling::JCoupling().

utility::vector1< Real > protocols::frag_picker::JCouplingIO::get_parameters

(

)

Definition at line 105 of file JCouplingIO.cc.

Referenced by protocols::frag_picker::scores::JCoupling::JCoupling().

void protocols::frag_picker::JCouplingIO::read

(

std::string const &

file_name)

Definition at line 44 of file JCouplingIO.cc.

References protocols::match::upstream::b, core::pack::dunbrack::c, and protocols::frag_picker::trJCouplingIO().

Member Data Documentation

Real protocols::frag_picker::JCouplingIO::A_

private

Definition at line 55 of file JCouplingIO.hh.

Real protocols::frag_picker::JCouplingIO::B_

private

Definition at line 55 of file JCouplingIO.hh.

Real protocols::frag_picker::JCouplingIO::C_

private

Definition at line 55 of file JCouplingIO.hh.

utility::vector1< utility::vector1< Real > > protocols::frag_picker::JCouplingIO::data_

private

Definition at line 54 of file JCouplingIO.hh.

Size protocols::frag_picker::JCouplingIO::sequence_length_

private

Definition at line 56 of file JCouplingIO.hh.

Real protocols::frag_picker::JCouplingIO::THETA_

private

Definition at line 55 of file JCouplingIO.hh.

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The documentation for this class was generated from the following files:

• src/protocols/frag_picker/JCouplingIO.hh
• src/protocols/frag_picker/JCouplingIO.cc