protocols::rotamer_recovery::RRComparerRotBins Class Reference

#include <RRComparer.hh>

Inheritance diagram for protocols::rotamer_recovery::RRComparerRotBins:

Collaboration diagram for protocols::rotamer_recovery::RRComparerRotBins:

Public Member Functions
	RRComparerRotBins ()
	~RRComparerRotBins ()
	RRComparerRotBins (RRComparerRotBins const &)
virtual std::string	get_name () const
virtual std::string	get_parameters () const
virtual void	set_recovery_threshold (core::Real const recovery_threshold)
virtual bool	measure_rotamer_recovery (core::pose::Pose const &pose1, core::pose::Pose const &pose2, core::conformation::Residue const &res1, core::conformation::Residue const &res2, core::Real &score, bool &recovered)
Public Member Functions inherited from protocols::rotamer_recovery::RRComparer
virtual	~RRComparer ()
	Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...

Private Attributes
core::Real	recovery_threshold_

Detailed Description

Definition at line 81 of file RRComparer.hh.

Constructor & Destructor Documentation

protocols::rotamer_recovery::RRComparerRotBins::RRComparerRotBins

(

)

Definition at line 51 of file RRComparer.cc.

protocols::rotamer_recovery::RRComparerRotBins::~RRComparerRotBins

(

)

Definition at line 60 of file RRComparer.cc.

protocols::rotamer_recovery::RRComparerRotBins::RRComparerRotBins

(

RRComparerRotBins const &

src)

Definition at line 55 of file RRComparer.cc.

Member Function Documentation

string protocols::rotamer_recovery::RRComparerRotBins::get_name ( ) const

virtual

Implements protocols::rotamer_recovery::RRComparer.

Definition at line 111 of file RRComparer.cc.

string protocols::rotamer_recovery::RRComparerRotBins::get_parameters ( ) const

virtual

Implements protocols::rotamer_recovery::RRComparer.

Definition at line 116 of file RRComparer.cc.

bool protocols::rotamer_recovery::RRComparerRotBins::measure_rotamer_recovery ( core::pose::Pose const &  pose1, core::pose::Pose const &  pose2, core::conformation::Residue const &  res1, core::conformation::Residue const &  res2, core::Real &  score, bool &  recovered  )

virtual

measure the rotamer recovery by comparing rotamer bins

Returns

true, if the measurement was successful, false otherwise

Implements protocols::rotamer_recovery::RRComparer.

Definition at line 72 of file RRComparer.cc.

References core::conformation::Residue::aa(), core::chemical::ResidueType::name(), core::conformation::Residue::name(), core::chemical::num_canonical_aas, recovery_threshold_, core::pack::dunbrack::rotamer_from_chi(), protocols::rotamer_recovery::TR(), and core::conformation::Residue::type().

void protocols::rotamer_recovery::RRComparerRotBins::set_recovery_threshold ( core::Real const  recovery_threshold)

virtual

Implements protocols::rotamer_recovery::RRComparer.

Definition at line 63 of file RRComparer.cc.

References recovery_threshold_.

Member Data Documentation

core::Real protocols::rotamer_recovery::RRComparerRotBins::recovery_threshold_

private

Definition at line 118 of file RRComparer.hh.

Referenced by measure_rotamer_recovery(), and set_recovery_threshold().

---

The documentation for this class was generated from the following files:

• src/protocols/rotamer_recovery/RRComparer.hh
• src/protocols/rotamer_recovery/RRComparer.cc