core::scoring::ResiduePairNeighborList Class Reference

#include <ResidueNeighborList.hh>

Inheritance diagram for core::scoring::ResiduePairNeighborList:

Collaboration diagram for core::scoring::ResiduePairNeighborList:

Public Types
typedef basic::datacache::CacheableData	parent
typedef basic::datacache::CacheableDataOP	CacheableDataOP
typedef basic::datacache::CacheableDataCOP	CacheableDataCOP

Public Member Functions
	ResiduePairNeighborList ()
virtual	~ResiduePairNeighborList ()
CacheableDataOP	clone () const
void	initialize_from_residues (Real vvd2, Real hvd2, Real hhd2, conformation::Residue const &r1, conformation::Residue const &r2, etable::count_pair::CountPairFunctionCOP cpfxn)
utility::vector1< SmallAtNb > const &	atom_neighbors () const

Private Attributes
utility::vector1< SmallAtNb >	atom_neighbors_

Detailed Description

Definition at line 293 of file ResidueNeighborList.hh.

Member Typedef Documentation

typedef basic::datacache::CacheableDataCOP core::scoring::ResiduePairNeighborList::CacheableDataCOP

Definition at line 298 of file ResidueNeighborList.hh.

typedef basic::datacache::CacheableDataOP core::scoring::ResiduePairNeighborList::CacheableDataOP

Definition at line 297 of file ResidueNeighborList.hh.

typedef basic::datacache::CacheableData core::scoring::ResiduePairNeighborList::parent

Definition at line 296 of file ResidueNeighborList.hh.

Constructor & Destructor Documentation

core::scoring::ResiduePairNeighborList::ResiduePairNeighborList

(

)

Definition at line 797 of file ResidueNeighborList.cc.

Referenced by clone().

core::scoring::ResiduePairNeighborList::~ResiduePairNeighborList ( )

virtual

Definition at line 798 of file ResidueNeighborList.cc.

Member Function Documentation

utility::vector1< SmallAtNb > const& core::scoring::ResiduePairNeighborList::atom_neighbors ( ) const

inline

Definition at line 316 of file ResidueNeighborList.hh.

References atom_neighbors_.

ResiduePairNeighborList::CacheableDataOP core::scoring::ResiduePairNeighborList::clone

(

)

const

Definition at line 800 of file ResidueNeighborList.cc.

References ResiduePairNeighborList().

void core::scoring::ResiduePairNeighborList::initialize_from_residues	(	Real	vvd2,
		Real	hvd2,
		Real	hhd2,
		conformation::Residue const &	r1,
		conformation::Residue const &	r2,
		etable::count_pair::CountPairFunctionCOP	cpfxn
	)

Definition at line 803 of file ResidueNeighborList.cc.

References core::conformation::Residue::atom_is_hydrogen(), atom_neighbors_, core::conformation::Residue::natoms(), and core::conformation::Residue::xyz().

Member Data Documentation

utility::vector1< SmallAtNb > core::scoring::ResiduePairNeighborList::atom_neighbors_

private

Definition at line 319 of file ResidueNeighborList.hh.

Referenced by atom_neighbors(), and initialize_from_residues().

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The documentation for this class was generated from the following files:

• src/core/scoring/ResidueNeighborList.hh
• src/core/scoring/ResidueNeighborList.cc