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src
protocols
features
RotamerBoltzmannWeightFeatures.hh
Go to the documentation of this file.
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// -*- mode:c++;tab-width:2;indent-tabs-mode:t;show-trailing-whitespace:t;rm-trailing-spaces:t -*-
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// vi: set ts=2 noet:
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//
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// (c) Copyright Rosetta Commons Member Institutions.
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// (c) This file is part of the Rosetta software suite and is made available under license.
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// (c) The Rosetta software is developed by the contributing members of the Rosetta Commons.
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// (c) For more information, see http://www.rosettacommons.org. Questions about this can be
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// (c) addressed to University of Washington UW TechTransfer, email: license@u.washington.edu.
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/// @file protocols/features/RotamerBoltzmannWeightFeatures.hh
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/// @brief report rotamer boltzmann weights to features Statistics Scientific Benchmark
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/// @author Matthew O'Meara
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#ifndef INCLUDED_protocols_features_RotamerBoltzmannWeightFeatures_hh
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#define INCLUDED_protocols_features_RotamerBoltzmannWeightFeatures_hh
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// Unit Headers
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#include <
protocols/features/FeaturesReporter.hh
>
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#include <
protocols/features/RotamerBoltzmannWeightFeatures.fwd.hh
>
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//External
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#include <boost/uuid/uuid.hpp>
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// Project Headers
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#include <
core/types.hh
>
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// AUTO-REMOVED #include <core/pose/Pose.hh>
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// AUTO-REMOVED #include <core/scoring/ScoreFunction.hh>
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#include <
protocols/filters/Filter.fwd.hh
>
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#include <
protocols/moves/Mover.fwd.hh
>
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#include <
protocols/moves/DataMap.fwd.hh
>
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// AUTO-REMOVED #include <protocols/protein_interface_design/filters/RotamerBoltzmannWeight.hh>
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// AUTO-REMOVED #include <utility/sql_database/DatabaseSessionManager.hh>
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#include <utility/vector1.fwd.hh>
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// C++ Headers
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#include <string>
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#include <
core/scoring/ScoreFunction.fwd.hh
>
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#include <
protocols/simple_filters/RotamerBoltzmannWeight.fwd.hh
>
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#include <utility/vector1.hh>
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namespace
protocols{
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namespace
features{
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class
RotamerBoltzmannWeightFeatures
:
public
protocols::features::FeaturesReporter
{
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public
:
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RotamerBoltzmannWeightFeatures
();
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RotamerBoltzmannWeightFeatures
(
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core::scoring::ScoreFunctionOP
scfxn);
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RotamerBoltzmannWeightFeatures
(
RotamerBoltzmannWeightFeatures
const
& src);
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virtual
~RotamerBoltzmannWeightFeatures
();
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///@brief return string with class name
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std::string
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type_name
()
const
;
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///@brief generate the table schemas and write them to the database
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void
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write_schema_to_db
(
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utility::sql_database::sessionOP db_session)
const
;
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private
:
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///@brief generate the rotamer_boltzmann_weight table schema
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void
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write_rotamer_boltzmann_weight_table_schema
(
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utility::sql_database::sessionOP db_session)
const
;
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public
:
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///@brief return the set of features reporters that are required to
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///also already be extracted by the time this one is used.
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utility::vector1<std::string>
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features_reporter_dependencies
()
const
;
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void
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parse_my_tag
(
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utility::tag::TagPtr
const
tag,
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protocols::moves::DataMap
& data,
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protocols::filters::Filters_map
const
&
/*filters*/
,
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protocols::moves::Movers_map
const
&
/*movers*/
,
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core::pose::Pose
const
&
/*pose*/
);
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///@brief collect all the feature data for the pose
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core::Size
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report_features
(
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core::pose::Pose
const
& pose,
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utility::vector1< bool >
const
& relevant_residues,
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boost::uuids::uuid struct_id,
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utility::sql_database::sessionOP db_session);
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private
:
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protocols::simple_filters::RotamerBoltzmannWeightFilterOP
rotamer_boltzmann_weight_
;
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};
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}
// namespace
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}
// namespace
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#endif // include guard
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