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core::sequence::SWAligner Member List

This is the complete list of members for core::sequence::SWAligner, including all inherited members.

align(SequenceOP seq_y, SequenceOP seq_x, ScoringSchemeOP ss)core::sequence::SWAlignervirtual
Aligner()core::sequence::Alignerinline
traceback(SequenceOP seq_x, SequenceOP seq_y, DP_Matrix matrix, CellOP start)core::sequence::Aligner
validate_input(SequenceOP seq_y, SequenceOP seq_x, ScoringSchemeOP ss)core::sequence::Aligner
~Aligner()core::sequence::Alignerinlinevirtual
~SWAligner()core::sequence::SWAlignerinlinevirtual
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