protocols::simple_filters::ExternalEvaluator Class Reference

#include <ExternalEvaluator.hh>

Inheritance diagram for protocols::simple_filters::ExternalEvaluator:

Collaboration diagram for protocols::simple_filters::ExternalEvaluator:

Public Member Functions
	ExternalEvaluator (std::string tag, std::string command="echo NO_COMMAND_SPECIFIED")
virtual	~ExternalEvaluator ()
virtual core::Real	apply (core::pose::Pose &pose) const
	evaluate pose More...
virtual bool	applicable (core::pose::Pose const &) const
void	set_command (std::string const &command_in)
std::string	scratch_dir () const
Public Member Functions inherited from protocols::evaluation::SingleValuePoseEvaluator< core::Real >
	SingleValuePoseEvaluator (std::string name)
virtual void	apply (core::pose::Pose &, std::string tag, core::io::silent::SilentStruct &pss) const
	evaluate pose and store values in Silent_Struct why is this specific to a specific type of SilentStruct? that seems needlessly pointless and overly constraining. More...
virtual core::Size	size () const
virtual std::string	name (core::Size) const
Public Member Functions inherited from protocols::evaluation::PoseEvaluator
	PoseEvaluator ()
virtual	~PoseEvaluator ()
virtual void	apply (core::io::silent::SilentStruct &pss) const
	direct application to SilentStruct... default implementation makes pose and calls "apply", you can overload if you don't need the pose-step More...

Private Attributes
std::string	command_
std::string	scratch_dir_
std::string	work_dir_

Detailed Description

Definition at line 48 of file ExternalEvaluator.hh.

Constructor & Destructor Documentation

protocols::simple_filters::ExternalEvaluator::ExternalEvaluator	(	std::string	tag,
		std::string	command = "echo NO_COMMAND_SPECIFIED"
	)

Definition at line 73 of file ExternalEvaluator.cc.

References protocols::swa::rna::file_exists(), protocols::evaluation::SingleValuePoseEvaluator< core::Real >::name(), protocols::RG(), scratch_dir_, protocols::simple_filters::tr(), and work_dir_.

protocols::simple_filters::ExternalEvaluator::~ExternalEvaluator ( )

virtual

Definition at line 183 of file ExternalEvaluator.cc.

References protocols::simple_filters::tr(), and work_dir_.

Member Function Documentation

virtual bool protocols::simple_filters::ExternalEvaluator::applicable ( core::pose::Pose const &  ) const

inlinevirtual

Reimplemented from protocols::evaluation::SingleValuePoseEvaluator< core::Real >.

Reimplemented in protocols::simple_filters::CamShiftEvaluator, and protocols::simple_filters::PalesEvaluator.

Definition at line 53 of file ExternalEvaluator.hh.

Referenced by apply().

core::Real protocols::simple_filters::ExternalEvaluator::apply ( core::pose::Pose &  ) const

virtual

evaluate pose

Implements protocols::evaluation::SingleValuePoseEvaluator< core::Real >.

Definition at line 146 of file ExternalEvaluator.cc.

References applicable(), command_, core::pose::Pose::dump_pdb(), protocols::simple_filters::tr(), and work_dir_.

std::string protocols::simple_filters::ExternalEvaluator::scratch_dir ( ) const

inline

Definition at line 55 of file ExternalEvaluator.hh.

References scratch_dir_.

Referenced by protocols::simple_filters::CamShiftEvaluator::CamShiftEvaluator(), and protocols::simple_filters::PalesEvaluator::PalesEvaluator().

void protocols::simple_filters::ExternalEvaluator::set_command ( std::string const &  command_in)

inline

Definition at line 54 of file ExternalEvaluator.hh.

References command_.

Referenced by protocols::simple_filters::CamShiftEvaluator::CamShiftEvaluator(), and protocols::simple_filters::PalesEvaluator::PalesEvaluator().

Member Data Documentation

std::string protocols::simple_filters::ExternalEvaluator::command_

private

Definition at line 59 of file ExternalEvaluator.hh.

Referenced by apply(), and set_command().

std::string protocols::simple_filters::ExternalEvaluator::scratch_dir_

private

Definition at line 60 of file ExternalEvaluator.hh.

Referenced by ExternalEvaluator(), and scratch_dir().

std::string protocols::simple_filters::ExternalEvaluator::work_dir_

private

Definition at line 61 of file ExternalEvaluator.hh.

Referenced by apply(), ExternalEvaluator(), and ~ExternalEvaluator().

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The documentation for this class was generated from the following files:

• src/protocols/simple_filters/ExternalEvaluator.hh
• src/protocols/simple_filters/ExternalEvaluator.cc