Rosetta 3.5
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Pages
Public Member Functions | List of all members
protocols::features::PoseCommentsFeatures Class Reference

#include <PoseCommentsFeatures.hh>

Inheritance diagram for protocols::features::PoseCommentsFeatures:
Inheritance graph
[legend]
Collaboration diagram for protocols::features::PoseCommentsFeatures:
Collaboration graph
[legend]

Public Member Functions

 PoseCommentsFeatures ()
 
 PoseCommentsFeatures (PoseCommentsFeatures const &)
 
virtual ~PoseCommentsFeatures ()
 
std::string type_name () const
 return string with class name More...
 
virtual void write_schema_to_db (utility::sql_database::sessionOP db_session) const
 generate the table schemas and write them to the database More...
 
utility::vector1< std::string > features_reporter_dependencies () const
 return the set of features reporters that are required to also already be extracted by the time this one is used. More...
 
core::Size report_features (core::pose::Pose const &pose, utility::vector1< bool > const &, boost::uuids::uuid struct_id, utility::sql_database::sessionOP db_session)
 collect all the feature data for the pose More...
 
void delete_record (boost::uuids::uuid struct_id, utility::sql_database::sessionOP db_session)
 
void load_into_pose (utility::sql_database::sessionOP db_session, boost::uuids::uuid struct_id, core::pose::Pose &pose)
 
- Public Member Functions inherited from protocols::features::FeaturesReporter
virtual ~FeaturesReporter ()
 Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...
 
virtual std::string schema () const
 return sql statements that sets up the appropriate tables to contain the features. This should be removed once everything has been moved to the schema generator More...
 
core::Size report_features (core::pose::Pose const &, boost::uuids::uuid, utility::sql_database::sessionOP)
 collect all the feature data for the pose. More...
 
virtual void parse_my_tag (utility::tag::TagPtr const tag, protocols::moves::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)
 

Additional Inherited Members

- Protected Member Functions inherited from protocols::features::FeaturesReporter
std::string find_tag (core::pose::Pose const &pose) const
 
void delete_records_from_table (std::string const &table_name, boost::uuids::uuid struct_id, utility::sql_database::sessionOP db_session)
 a helper function for deleting data associated with a given structure from feature database WARNING table_name must be sanitized! More...
 

Detailed Description

Definition at line 40 of file PoseCommentsFeatures.hh.

Constructor & Destructor Documentation

protocols::features::PoseCommentsFeatures::PoseCommentsFeatures ( )
inline

Definition at line 42 of file PoseCommentsFeatures.hh.

protocols::features::PoseCommentsFeatures::PoseCommentsFeatures ( PoseCommentsFeatures const &  )
inline

Definition at line 44 of file PoseCommentsFeatures.hh.

virtual protocols::features::PoseCommentsFeatures::~PoseCommentsFeatures ( )
inlinevirtual

Definition at line 49 of file PoseCommentsFeatures.hh.

Member Function Documentation

void protocols::features::PoseCommentsFeatures::delete_record ( boost::uuids::uuid  struct_id,
utility::sql_database::sessionOP  db_session 
)
virtual

Reimplemented from protocols::features::FeaturesReporter.

Definition at line 148 of file PoseCommentsFeatures.cc.

utility::vector1< std::string > protocols::features::PoseCommentsFeatures::features_reporter_dependencies ( ) const
virtual

return the set of features reporters that are required to also already be extracted by the time this one is used.

Reimplemented from protocols::features::FeaturesReporter.

Definition at line 110 of file PoseCommentsFeatures.cc.

void protocols::features::PoseCommentsFeatures::load_into_pose ( utility::sql_database::sessionOP  db_session,
boost::uuids::uuid  struct_id,
core::pose::Pose pose 
)
virtual

Reimplemented from protocols::features::FeaturesReporter.

Definition at line 161 of file PoseCommentsFeatures.cc.

References core::pose::add_comment().

Size protocols::features::PoseCommentsFeatures::report_features ( core::pose::Pose const &  pose,
utility::vector1< bool > const &  ,
boost::uuids::uuid  struct_id,
utility::sql_database::sessionOP  db_session 
)
virtual

collect all the feature data for the pose

Implements protocols::features::FeaturesReporter.

Definition at line 118 of file PoseCommentsFeatures.cc.

References core::pose::get_all_comments().

string protocols::features::PoseCommentsFeatures::type_name ( ) const
virtual

return string with class name

Reimplemented from protocols::features::FeaturesReporter.

Definition at line 84 of file PoseCommentsFeatures.cc.

void protocols::features::PoseCommentsFeatures::write_schema_to_db ( utility::sql_database::sessionOP  db_session) const
virtual

generate the table schemas and write them to the database

Implements protocols::features::FeaturesReporter.

Definition at line 87 of file PoseCommentsFeatures.cc.


The documentation for this class was generated from the following files: