core::optimization::CartesianMinimizer Class Reference

High-level atom tree minimizer class. More...

#include <CartesianMinimizer.hh>

Inheritance diagram for core::optimization::CartesianMinimizer:

Collaboration diagram for core::optimization::CartesianMinimizer:

Public Member Functions
	CartesianMinimizer ()
virtual	~CartesianMinimizer ()
virtual Real	run (pose::Pose &pose, kinematics::MoveMap const &move_map, scoring::ScoreFunction const &scorefxn, MinimizerOptions const &options)
	run minimization and return the final score at minimization's conclusion. Virtual allowing derived classes to mascarade as CartesianMinimizers. Non-const so that it can modify its deriv_check_result_ object. More...
NumericalDerivCheckResultOP	deriv_check_result () const
	After minimization has concluded, the user may access the deriv-check result, assuming that they have run the CartesianMinimizer with deriv_check = true;. More...

Private Attributes
NumericalDerivCheckResultOP	deriv_check_result_

Detailed Description

High-level atom tree minimizer class.

Definition at line 43 of file CartesianMinimizer.hh.

Constructor & Destructor Documentation

core::optimization::CartesianMinimizer::CartesianMinimizer

(

)

Definition at line 50 of file CartesianMinimizer.cc.

core::optimization::CartesianMinimizer::~CartesianMinimizer ( )

virtual

Definition at line 53 of file CartesianMinimizer.cc.

Member Function Documentation

NumericalDerivCheckResultOP core::optimization::CartesianMinimizer::deriv_check_result

(

)

const

After minimization has concluded, the user may access the deriv-check result, assuming that they have run the CartesianMinimizer with deriv_check = true;.

Definition at line 126 of file CartesianMinimizer.cc.

Real core::optimization::CartesianMinimizer::run ( pose::Pose &  pose, kinematics::MoveMap const &  move_map, scoring::ScoreFunction const &  scorefxn, MinimizerOptions const &  options  )

virtual

run minimization and return the final score at minimization's conclusion. Virtual allowing derived classes to mascarade as CartesianMinimizers. Non-const so that it can modify its deriv_check_result_ object.

Definition at line 57 of file CartesianMinimizer.cc.

References core::optimization::CartesianMinimizerMap::copy_dofs_from_pose(), core::optimization::MinimizerOptions::deriv_check(), core::optimization::MinimizerOptions::deriv_check_to_stdout(), core::optimization::MinimizerOptions::deriv_check_verbose(), core::optimization::CartesianMinimizerMap::domain_map(), core::pose::Pose::energies(), core::optimization::MinimizerOptions::nblist_auto_update(), core::optimization::CartesianMinimizerMap::ndofs(), core::scoring::Energies::reset_nblist(), core::optimization::Minimizer::run(), core::optimization::NumericalDerivCheckResult::send_to_stdout(), core::optimization::CartesianMultifunc::set_deriv_check_result(), core::scoring::Energies::set_use_nblist(), core::optimization::CartesianMinimizerMap::setup(), core::scoring::ScoreFunction::setup_for_minimizing(), and core::optimization::MinimizerOptions::use_nblist().

Referenced by protocols::simple_moves::SaneMinMover::apply(), protocols::simple_moves::symmetry::SymMinMover::apply(), and protocols::hybridization::HybridizeProtocol::apply().

Member Data Documentation

NumericalDerivCheckResultOP core::optimization::CartesianMinimizer::deriv_check_result_

private

Definition at line 72 of file CartesianMinimizer.hh.

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The documentation for this class was generated from the following files:

• src/core/optimization/CartesianMinimizer.hh
• src/core/optimization/CartesianMinimizer.cc