HBAtom.cc

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// -*- mode:c++;tab-width:2;indent-tabs-mode:t;show-trailing-whitespace:t;rm-trailing-spaces:t -*-
// vi: set ts=2 noet:
//
// (c) Copyright Rosetta Commons Member Institutions.
// (c) This file is part of the Rosetta software suite and is made available under license.
// (c) The Rosetta software is developed by the contributing members of the Rosetta Commons.
// (c) For more information, see http://www.rosettacommons.org. Questions about this can be
// (c) addressed to University of Washington UW TechTransfer, email: license@u.washington.edu.

/// @file   core/scoring/hbonds/hbtrie/HBAtom.hh
/// @brief
/// @author Andrew Leaver-Fay (aleaverfay@gmail.com)

// Unit Headers
#include <core/scoring/hbonds/hbtrie/HBAtom.hh>

// Project Headers
#include <core/types.hh>

// STL Headers
#include <iostream>

// Numceric Headers
#include <numeric/xyzVector.hh>

namespace core {
namespace scoring {
namespace hbonds {
namespace hbtrie {


HBAtom::HBAtom() :
  xyz_(0,0,0),
  base_xyz_(0,0,0),
  base2_xyz_(0,0,0),
  is_hydrogen_( false ),
  is_backbone_( false ),
  is_protein_( false ),
  is_dna_( false ),
  hb_chem_type_( 0 )
  //,seqpos_( 0 )
{}

HBAtom::~HBAtom() {}

/// @brief send a description of the atom to standard out
void
HBAtom::print() const { print( std::cout ); }

/// @brief send a description of the atom to an output stream
void
HBAtom::print( std::ostream & os ) const
{
  os << "HBAtom" <<  " ";
  os << "(" << xyz().x();
  os << ", " << xyz().y();
  os << ", " << xyz().z() << "), abase";
  os << "(" << base_xyz().x();
  os << ", " << base_xyz().y();
  os << ", " << base_xyz().z() << "), abase2";
  os << "(" << base2_xyz().x();
  os << ", " << base2_xyz().y();
  os << ", " << base2_xyz().z() << "), ";
  os << hb_chem_type_ << ";";
}

std::ostream & operator << ( std::ostream & os, HBAtom const & atom )
{
  atom.print( os );
  return os;
}

} // namespace hbtrie
} // namespace hbonds
} // namespace scoring
} // namespace core