core::chemical::AddConnect Class Reference

#include <PatchOperation.hh>

Inheritance diagram for core::chemical::AddConnect:

Collaboration diagram for core::chemical::AddConnect:

Public Member Functions
	AddConnect (std::string const &connect_atom, Real const phi, Real const theta, Real const d, std::string const &parent_atom, std::string const &angle_atom, std::string const &torsion_atom)
bool	apply (ResidueType &rsd) const
	add a property More...
Public Member Functions inherited from core::chemical::PatchOperation
virtual	~PatchOperation ()
	Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...

Private Attributes
std::string const	connect_atom_
Real const	phi_
Real const	theta_
Real const	d_
std::string const	parent_atom_
std::string const	angle_atom_
std::string const	torsion_atom_

Detailed Description

Definition at line 160 of file PatchOperation.hh.

Constructor & Destructor Documentation

core::chemical::AddConnect::AddConnect ( std::string const &  connect_atom, Real const  phi, Real const  theta, Real const  d, std::string const &  parent_atom, std::string const &  angle_atom, std::string const &  torsion_atom  )

inline

Definition at line 164 of file PatchOperation.hh.

Member Function Documentation

bool core::chemical::AddConnect::apply ( ResidueType &  rsd) const

inlinevirtual

add a property

Implements core::chemical::PatchOperation.

Definition at line 180 of file PatchOperation.hh.

References core::chemical::ResidueType::add_residue_connection(), angle_atom_, connect_atom_, d_, core::chemical::ResidueType::has(), parent_atom_, phi_, core::chemical::ResidueType::set_icoor(), theta_, and torsion_atom_.

Member Data Documentation

std::string const core::chemical::AddConnect::angle_atom_

private

Definition at line 198 of file PatchOperation.hh.

Referenced by apply().

std::string const core::chemical::AddConnect::connect_atom_

private

Definition at line 193 of file PatchOperation.hh.

Referenced by apply().

Real const core::chemical::AddConnect::d_

private

Definition at line 196 of file PatchOperation.hh.

Referenced by apply().

std::string const core::chemical::AddConnect::parent_atom_

private

Definition at line 197 of file PatchOperation.hh.

Referenced by apply().

Real const core::chemical::AddConnect::phi_

private

Definition at line 194 of file PatchOperation.hh.

Referenced by apply().

Real const core::chemical::AddConnect::theta_

private

Definition at line 195 of file PatchOperation.hh.

Referenced by apply().

std::string const core::chemical::AddConnect::torsion_atom_

private

Definition at line 199 of file PatchOperation.hh.

Referenced by apply().

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The documentation for this class was generated from the following file:

• src/core/chemical/PatchOperation.hh